RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 GALNT4Q8N4A0 578 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 CBR4Q8N4T8 237 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC37A3Q8NCC5 494 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 BBS1Q8NFJ9 593 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 STEAP2Q8NFT2 490 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 KBTBD8Q8NFY9 601 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 OR52L1Q8NGH7 329 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 AKR7LQ8NHP1 331 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 TEX47Q8TBZ9 253 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 UBE2FQ969M7 185 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 NMD3Q96D46 503 aaKnown RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 MUCL1Q96DR8 90 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 RADILQ96JH8 1075 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ADAD1Q96M93 576 aaKnown RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 MUS81Q96NY9 551 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 RBP7Q96R05 134 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 FOXB1Q99853 325 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SPOCK3Q9BQ16 436 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 BDH2Q9BUT1 245 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 DGCR6LQ9BY27 220 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 GRIP2Q9C0E4 1043 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 OR51B6Q9H340 312 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 RNF121Q9H920 327 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 UBTD1Q9HAC8 227 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF556Q9HAH1 456 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 FANCFQ9NPI8 374 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 B3GAT2Q9NPZ5 323 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC17A5Q9NRA2 495 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 KRT84Q9NSB2 600 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 TVP23BQ9NYZ1 205 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF224Q9NZL3 707 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 MOKQ9UQ07 419 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC25A15Q9Y619 301 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 DNAJC13O75165 2243 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 NBASA2RRP1 2371 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 IGHV1-18A0A0C4DH31 117 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 HTR3EA5X5Y0 456 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF99A8MXY4 864 aaPredicted RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ATP6V1G2-DDX39BF2Z307 99 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 RPL36A-HNRNPH2H7BZ11 118 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ABCD4O14678 606 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 PRKYO43930 277 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CTAG2O75638 210 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 APOL3O95236 402 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CNOT4O95628 575 aaKnown RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 WNT11O96014 354 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 RENP00797 406 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 HLA-DQA2P01906 255 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 TFP02787 698 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 HRGP04196 525 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 FCGR1AP12314 374 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ANXA8P13928 327 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF32P17041 273 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 GSTM3P21266 225 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CCNOP22674 350 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CRYGSP22914 178 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 IGFBP5P24593 272 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 APEX1P27695 318 aaKnown RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 LOXP28300 417 aaPredicted RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 PEX2P28328 305 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CALCRP30988 508 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 HOXC12P31275 282 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF84P51523 738 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 HCCSP53701 268 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CRISP1P54107 249 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ERVS71-1P61550 626 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 RAB1AP62820 205 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CDK5Q00535 292 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 TGFBR3Q03167 851 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ENDOGQ14249 297 aaKnown RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 PTGES3Q15185 160 aaKnown RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 TRIP10Q15642 601 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 HIST3H3Q16695 136 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 KLHL12Q53G59 568 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 TIMM23BQ5SRD1 257 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 THEM4Q5T1C6 240 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 KDM4DQ6B0I6 523 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 GPR139Q6DWJ6 353 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ZFP1Q6P2D0 407 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 PLBD1Q6P4A8 553 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 FAHD1Q6P587 224 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC22A25Q6T423 547 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 SPATC1Q76KD6 591 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ABHD12BQ7Z5M8 362 aaPredicted RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 CDC20BQ86Y33 519 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 HIPK1Q86Z02 1210 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 LINC00346Q8IVM7 164 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 SVOPLQ8N434 492 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 LNX2Q8N448 690 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC22A24Q8N4F4 322 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 PAQR4Q8N4S7 273 aaPredicted RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 LINC00471Q8N535 108 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF511Q8NB15 262 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 ACBD4Q8NC06 268 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 NPEPL1Q8NDH3 523 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 PROKR2Q8NFJ6 384 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 OR2T33Q8NG76 320 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 LILRB1Q8NHL6 650 aaPredicted RBP4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 FAM222BQ8WU58 562 aa4.01□□□□□ -1.77
CHMP4A-202ENST00000524955 C11orf40Q8WZ69 217 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms