RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 IGHV1-46P01743 117 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 MT-ND5P03915 603 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 QDPRP09417 244 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 PRTN3P24158 256 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 ZNF81P51508 661 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 DEFA6Q01524 100 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 SLC36A2Q495M3 483 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 NRN1LQ496H8 165 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 FAM209AQ5JX71 171 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 HHATQ5VTY9 493 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 ZNF771Q7L3S4 317 aaPredicted RBP19.27■□□□□ 0.68
PVT1-218ENST00000523328 SLC16A14Q7RTX9 510 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 ANKRD42Q8N9B4 389 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 CCL17Q92583 94 aa19.27■□□□□ 0.68
PVT1-218ENST00000523328 C1orf147Q96MC9 270 aaPredicted RBP19.27■□□□□ 0.68
PVT1-218ENST00000523328 PPIAL4EA0A075B759 164 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 PPIAL4CA0A0B4J2A2 164 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 PPIAL4DF5H284 164 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 UBOX5O94941 541 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 MMP7P09237 267 aaPredicted RBP19.26■□□□□ 0.67
PVT1-218ENST00000523328 PPIAL4FP0DN26 164 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 DRD4P21917 467 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 ZFP36P26651 326 aaKnown RBP19.26■□□□□ 0.67
PVT1-218ENST00000523328 MMP15P51511 669 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 SCARB2Q14108 478 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 ZNF74Q16587 644 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 TREML4Q6UXN2 200 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 DOK3Q7L591 496 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 RANBP3LQ86VV4 465 aaPredicted RBP19.26■□□□□ 0.67
PVT1-218ENST00000523328 RBM15BQ8NDT2 890 aaKnown RBP19.26■□□□□ 0.67
PVT1-218ENST00000523328 DEFB108BQ8NET1 73 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 BHLHE22Q8NFJ8 381 aaPredicted RBP19.26■□□□□ 0.67
PVT1-218ENST00000523328 OR1J1Q8NGS3 322 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 DUX5Q96PT3 197 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 CENPHQ9H3R5 247 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 TMEM38AQ9H6F2 299 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 TRIM33Q9UPN9 1127 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 GMEB1Q9Y692 573 aa19.26■□□□□ 0.67
PVT1-218ENST00000523328 IQCMA0A1B0GVH7 501 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 DNAJC9-AS1A6NH13 148 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 RNF13O43567 381 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 CHP2O43745 196 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 CH25HO95992 272 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 AQP1P29972 269 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 PLP2Q04941 152 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 HIST3H3Q16695 136 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 WDR93Q6P2C0 686 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 ZNF613Q6PF04 617 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 RBMS3Q6XE24 437 aaKnown RBP19.25■□□□□ 0.67
PVT1-218ENST00000523328 TREML1Q86YW5 311 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 LRRC17Q8N6Y2 441 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 CPEB3Q8NE35 698 aaKnown RBP19.25■□□□□ 0.67
PVT1-218ENST00000523328 ZBTB9Q96C00 473 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 ZNF607Q96SK3 696 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 MCHR1Q99705 422 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 LRMDAQ9H2I8 198 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 IKZF5Q9H5V7 419 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 EVA1AQ9H8M9 152 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 VAPAQ9P0L0 249 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 LEF1Q9UJU2 399 aaPredicted RBP19.25■□□□□ 0.67
PVT1-218ENST00000523328 SLC13A4Q9UKG4 626 aa19.25■□□□□ 0.67
PVT1-218ENST00000523328 ISPDA4D126 451 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 SPRY3O43610 288 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 FMO6PO60774 539 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 LYPD3O95274 346 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 THY1P04216 161 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 CEP85LQ5SZL2 805 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 ARMC8Q8IUR7 673 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 ZNF101Q8IZC7 436 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 POP5Q969H6 163 aaKnown RBP19.24■□□□□ 0.67
PVT1-218ENST00000523328 MCHR2Q969V1 340 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 UNKLQ9H9P5 680 aaKnown RBP19.24■□□□□ 0.67
PVT1-218ENST00000523328 SLCO1B3Q9NPD5 702 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 MMP26Q9NRE1 261 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 UBAP1Q9NZ09 502 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 ZNF69Q9UC07 566 aa19.24■□□□□ 0.67
PVT1-218ENST00000523328 TRBV5-3A0A0A0MS03 114 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 ZSCAN5BA6NJL1 495 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 M0R3H8 397 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 SERPINB7O75635 380 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 IGHG1P01857 330 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 SLC6A2P23975 617 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 APLNRP35414 380 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 MPV17P39210 176 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 FUNDC1Q8IVP5 155 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 LRRC18Q8N456 261 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 ST7LQ8TDW4 575 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 IPCEF1Q8WWN9 437 aaPredicted RBP19.23■□□□□ 0.67
PVT1-218ENST00000523328 MARS2Q96GW9 593 aaKnown RBP19.23■□□□□ 0.67
PVT1-218ENST00000523328 ZNF347Q96SE7 839 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 ARHGDIGQ99819 225 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 MRPL13Q9BYD1 178 aaKnown RBP19.23■□□□□ 0.67
PVT1-218ENST00000523328 ZMAT3Q9HA38 289 aaKnown RBP19.23■□□□□ 0.67
PVT1-218ENST00000523328 NANSQ9NR45 359 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 NUP50Q9UKX7 468 aa19.23■□□□□ 0.67
PVT1-218ENST00000523328 FOXH1O75593 365 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 ADH4P08319 380 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 ASAH2BP0C7U1 165 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 GPX2P18283 190 aa19.22■□□□□ 0.67
PVT1-218ENST00000523328 PPIBP23284 216 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms