RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SLC22A25Q6T423 547 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 DOK3Q7L591 496 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 SECTM1Q8WVN6 248 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 FGGYQ96C11 551 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 ABHD6Q9BV23 337 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 ATPIF1Q9UII2 106 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 POLDIP2Q9Y2S7 368 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 ITGB4P16144 1822 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 CACNA1SQ13698 1873 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 SCG5P05408 212 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 IDH3GP51553 393 aaPredicted RBP14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 ZNF133P52736 654 aaPredicted RBP14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 PAN3Q58A45 887 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 STEAP3Q658P3 488 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 KDM8Q8N371 416 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 OR4A16Q8NH70 328 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 OR56B4Q8NH76 319 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 PIGLQ9Y2B2 252 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 TSPAN11A1L157 253 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 SULT1C2O00338 296 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 HOXB5P09067 269 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 NDUFB7P17568 137 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 TRIM23P36406 574 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 RAP2BP61225 183 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 DUSP8Q13202 625 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 OR8G1Q15617 311 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 HYAL4Q2M3T9 481 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 EMC4Q5J8M3 183 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 APOOLQ6UXV4 268 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 PELI3Q8N2H9 469 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 CLDN22Q8N7P3 220 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 OR2A1Q8NGT9 310 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 NMNAT2Q9BZQ4 307 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 SOCS6O14544 535 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 CBR3O75828 277 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 RAD52P43351 418 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 TEKQ02763 1124 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 GALEQ14376 348 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 RBMS2Q15434 407 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 SFRP5Q5T4F7 317 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 NAXDQ8IW45 347 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 EMG1Q92979 244 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 SEMA4GQ9NTN9 838 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 A0A1W2PS29 197 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 A6NIN4 97 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 CXCL13O43927 109 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 LCMT2O60294 686 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 SPCS2Q15005 226 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 WFDC8Q8IUA0 241 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 OLIG1Q8TAK6 271 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 STK35Q8TDR2 534 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 TUBB1Q9H4B7 451 aa14.88□□□□□ -0.03
PCDHA3-201ENST00000522353 C7orf72A4D263 438 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 OR6C6A6NF89 314 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 CTDSP2O14595 271 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 TMEM102Q8N9M5 508 aaPredicted RBP14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 OR52N1Q8NH53 320 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 PIGTQ969N2 578 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 ZNF486Q96H40 463 aaPredicted RBP14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 KIRREL1Q96J84 757 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 EMC6Q9BV81 110 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 PTTG3PQ9NZH4 202 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 CLEC1BQ9P126 229 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 SLC22A23A1A5C7 686 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 QDPRP09417 244 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 LIPCP11150 499 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 TBXA2RP21731 343 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 FAPQ12884 760 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 EDDM3AQ14507 147 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 IL11RAQ14626 422 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 PRTGQ2VWP7 1150 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 DHRS13Q6UX07 377 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 GFRALQ6UXV0 394 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 SYT9Q86SS6 491 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 BHLHE23Q8NDY6 225 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 OR4D6Q8NGJ1 314 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 OR14A2Q96R54 314 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 SLCO5A1Q9H2Y9 848 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 B3GALT5Q9Y2C3 310 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 C1orf196B1AJZ1 125 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 THEM4Q5T1C6 240 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 OR51A2Q8NGJ7 313 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 C1QTNF3Q9BXJ4 246 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 ETV7Q9Y603 341 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 SLC16A6O15403 523 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 MED6O75586 246 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 HOXA1P49639 335 aaPredicted RBP14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 MFGE8Q08431 387 aaPredicted RBP14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 KCNJ8Q15842 424 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 ZNF628Q5EBL2 1059 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 OLIG3Q7RTU3 272 aa14.87□□□□□ -0.03
PCDHA3-201ENST00000522353 LRP5LA4QPB2 252 aa14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 E9PI62 339 aa14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 LINC01387J3KSC0 135 aa14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 ZNF254O75437 659 aa14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 MMP11P24347 488 aa14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 CLDN15P56746 228 aa14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 MZB1Q8WU39 189 aa14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 ANKRD9Q96BM1 317 aaPredicted RBP14.86□□□□□ -0.03
PCDHA3-201ENST00000522353 LRFN5Q96NI6 719 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms