RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 ZNF321PQ8N8H1 164 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 ZNF615Q8N8J6 731 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 COX18Q8N8Q8 333 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 CDRT4Q8N9R6 151 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 SMYD1Q8NB12 490 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 MORN4Q8NDC4 146 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 OR7G1Q8NGA0 311 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 OR52E4Q8NGH9 312 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 FAM110BQ8TC76 370 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 SPPL2AQ8TCT8 520 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 CT55Q8WUE5 264 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 LZICQ8WZA0 190 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 PIK3R3Q92569 461 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 DAZLQ92904 295 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 POP5Q969H6 163 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 TAMM41Q96BW9 452 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 C8orf44Q96CB5 159 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 SLC47A1Q96FL8 570 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 DUS3LQ96G46 650 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 RMND5BQ96G75 393 aaPredicted RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 VSTM2LQ96N03 204 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 COL21A1Q96P44 957 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 TRNT1Q96Q11 434 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 ZNF607Q96SK3 696 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 TREX2Q9BQ50 279 aaPredicted RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 DDA1Q9BW61 102 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 NUDT9Q9BW91 350 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 CHID1Q9BWS9 393 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 SLC26A1Q9H2B4 701 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 PIGUQ9H490 435 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 YY1AP1Q9H869 796 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 MTHFD2LQ9H903 347 aaPredicted RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 WDR54Q9H977 334 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 CACYBPQ9HB71 228 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 FOLH1BQ9HBA9 442 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 OLAHQ9NV23 265 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 ARMC1Q9NVT9 282 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 C6orf203Q9P0P8 240 aaPredicted RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 STX18Q9P2W9 335 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 COPS7AQ9UBW8 275 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 PRODH2Q9UF12 536 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 C19orf25Q9UFG5 118 aaPredicted RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 RPS6KA6Q9UK32 745 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 NXT1Q9UKK6 140 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 SAMD4AQ9UPU9 718 aaKnown RBP3.43□□□□□ -1.86
CLK4-207ENST00000520909 SATB2Q9UPW6 733 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 LIPT1Q9Y234 373 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 OR10H1Q9Y4A9 318 aa3.43□□□□□ -1.86
CLK4-207ENST00000520909 DMXL1Q9Y485 3027 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 NPIPA5A0A0B4J1W7 369 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 C2orf92A0A1B0GVN3 265 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SYNDIG1LA6NDD5 238 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SAGE2PA6NJ88 616 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 OR6C76A6NM76 312 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 NPIPA7E9PJI5 369 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 hCG_2039718K7EN88 272 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 GNGT2O14610 69 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SLC30A4O14863 429 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 RTL8CO15255 209 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CLOCKO15516 846 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 FCMRO60667 390 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 STX11O75558 287 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 KLF7O75840 302 aaPredicted RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 KCNK2O95069 426 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 NKX2-2O95096 273 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 MFN2O95140 757 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 AK1P00568 194 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 IGKV1D-16P01601 117 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 RAF1P04049 648 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CLPSP04118 112 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 IGKV3-11P04433 115 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 RAB40ALP0C0E4 278 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 FRMD6-AS1P0C7T7 363 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 NPIPA8P0DM63 369 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CT45A8P0DMV1 189 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CT45A9P0DMV2 189 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ETS2P15036 469 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 TCN2P20062 427 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ATP6V1C1P21283 382 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 OTX2P32243 289 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 MAP3K8P41279 467 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 PPICP45877 212 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 RFX3P48380 749 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CRYBA2P53672 197 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SLC26A5P58743 744 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 RPS18P62269 152 aaKnown RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 RPS15P62841 145 aaKnown RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 VAMP2P63027 116 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SELENOWP63302 87 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 FUT5Q11128 374 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 FGFBP1Q14512 234 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 TRIP10Q15642 601 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 GPR68Q15743 365 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 MAPK11Q15759 364 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ATP6AP1Q15904 470 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 NNATQ16517 81 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 LRRC36Q1X8D7 754 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms