RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 PURGQ9UJV8 347 aaKnown RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 HCFC2Q9Y5Z7 792 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 COL22A1Q8NFW1 1626 aaPredicted RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 H3BQ06 376 aaPredicted RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 GIPP09681 153 aaPredicted RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 TRHRP34981 398 aaPredicted RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 HNRNPA3P51991 378 aaKnown RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 HBA1P69905 142 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 PRDX1Q06830 199 aaKnown RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 SYT6Q5T7P8 510 aaPredicted RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 SPRED1Q7Z699 444 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 OR8J2Q8NGG1 315 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 OR6F1Q8NGZ6 308 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 BOD1Q96IK1 185 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 ARV1Q9H2C2 271 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 CCL26Q9Y258 94 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 SLCO1B1Q9Y6L6 691 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 DDX60LQ5H9U9 1706 aaKnown RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 LNP1A1A4G5 178 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 TIMM8AO60220 97 aaPredicted RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 GPR75O95800 540 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 ACP2P11117 423 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 SERPINA2P20848 420 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 CNR1P21554 472 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 CD38P28907 300 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 CARD18P57730 90 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 YPEL5P62699 121 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 HTRA3P83110 453 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 TOMM34Q15785 309 aaPredicted RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 SYPL1Q16563 259 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 NHSL2Q5HYW2 709 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 TMEM244Q5VVB8 128 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 KDM8Q8N371 416 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 C4orf36Q96KX1 117 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC35D1Q9NTN3 355 aa11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 EXO1Q9UQ84 846 aaKnown RBP11.19□□□□□ -0.62
ERGIC1-208ENST00000520399 COL16A1Q07092 1604 aaPredicted RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC22A23A1A5C7 686 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SULT2B1O00204 365 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 LGI1O95970 557 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 GSTP1P09211 210 aaKnown RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 DCAF7P61962 342 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC35A2P78381 396 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 LTC4SQ16873 150 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 FAM162BQ5T6X4 162 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 CST9Q5W186 159 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PISDQ9UG56 409 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PRAMEF27A3QJZ7 478 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 LINC00862A6NCI5 91 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 LY86O95711 162 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 CER1O95813 267 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 LAP3P28838 519 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SUB1P53999 127 aaKnown RBP eCLIP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 ADPRMQ3LIE5 342 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PRAMEF9Q5VWM5 478 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 C19orf47Q8N9M1 422 aaKnown RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC24A4Q8NFF2 622 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 UCN3Q969E3 161 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SORCS2Q96PQ0 1159 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 NIPSNAP3BQ9BS92 247 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SGPP1Q9BX95 441 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 WWTR1Q9GZV5 400 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 LRIT1Q9P2V4 623 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 NHSL1Q5SYE7 1610 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 NHSQ6T4R5 1651 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 IGLV3-10A0A075B6K4 115 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 GAPDHSO14556 408 aaPredicted RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PSMB10P40306 273 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 CXCL12P48061 93 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PSMB3P49720 205 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 FOXO1Q12778 655 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 MOGAT2Q3SYC2 334 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PTP4A1Q93096 173 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SLC25A18Q9H1K4 315 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 C1orf123Q9NWV4 160 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 ACOD1A6NK06 481 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 IGHEP01854 428 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 TNK1Q13470 666 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 SHISA6Q6ZSJ9 500 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 ZNF595Q8IYB9 648 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 ADGRF3Q8IZF5 1079 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 VN1R2Q8NFZ6 395 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 YIPF5Q969M3 257 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 EGLN2Q96KS0 407 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 EHFQ9NZC4 300 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 M0QZ24 198 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 AP4M1O00189 453 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 RGS11O94810 467 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 TCRBP04435 133 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 FOLR1P15328 257 aa11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 TAGLN2P37802 199 aaKnown RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 PXNP49023 591 aaPredicted RBP11.18□□□□□ -0.62
ERGIC1-208ENST00000520399 TAS2R19P59542 299 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms