RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 HTR4Q13639 388 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 SFTPA2Q8IWL1 248 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ESX1Q8N693 406 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 BORCS8Q96FH0 119 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 NECAB3Q96P71 396 aaPredicted RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 AUNIPQ9H7T9 357 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 MED29Q9NX70 200 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 TRAV36DV7A0A075B6V5 113 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 TMEM82A0PJX8 343 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CNOT4O95628 575 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CD79AP11912 226 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CLDN17P56750 224 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 RPL18Q07020 188 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ACKR1Q16570 336 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CDONQ4KMG0 1287 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 HEPHL1Q6MZM0 1159 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 GPR155Q7Z3F1 870 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 OR51S1Q8NGJ8 323 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 OR8D4Q8NGM9 314 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 MAFIPQ8WZ33 124 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 TMEM43Q9BTV4 400 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 GGT3PA6NGU5 568 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 SIGLEC6O43699 453 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 IGHG1P01857 330 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF35P13682 527 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CAV2P51636 162 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 PCBP3P57721 371 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 PCBP4P57723 403 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 MRPS10P82664 201 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 FGL1Q08830 312 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 C19orf57Q0VDD7 668 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ASAH1Q13510 395 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 C1orf140Q5VVS0 124 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 THSD4Q6ZMP0 1018 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 GIMAP5Q96F15 307 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 C12orf57Q99622 126 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ULBP2Q9BZM5 246 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 SLC52A3Q9NQ40 469 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 KLK11Q9UBX7 282 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CELA2BP08218 269 aaPredicted RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CD79BP40259 229 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 POLR2HP52434 150 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 SEC61A1P61619 476 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 DEFA6Q01524 100 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 GK2Q14410 553 aaPredicted RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 OPCMLQ14982 345 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ZXDCQ2QGD7 858 aaPredicted RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF585AQ6P3V2 769 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 VN1R4Q7Z5H5 301 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 CHRDQ9H2X0 955 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 IL20Q9NYY1 176 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 KLHL13Q9P2N7 655 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF346Q9UL40 294 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 MOKQ9UQ07 419 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 HS3ST3A1Q9Y663 406 aa10.7□□□□□ -0.7
SYNPO-204ENST00000519664 SPTBN1Q01082 2364 aaKnown RBP10.7□□□□□ -0.7
SYNPO-204ENST00000519664 A0A1W2PNR3 127 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 STMND1H3BQB6 276 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 BRINP1O60477 761 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 FBXO24O75426 580 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 EML2O95834 649 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 CRYBB2P43320 205 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 TAS2R19P59542 299 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 PXKQ7Z7A4 578 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 TRAPPC6BQ86SZ2 158 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 CCDC190Q86UF4 302 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 ETFBKMTQ8IXQ9 262 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 STEAP2Q8NFT2 490 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 C1orf198Q9H425 327 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 DOCK6Q96HP0 2047 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 hCG_1807616A0A1W2PRN6 198 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 IDSB3KWA1 339 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 ICOSLGO75144 302 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 IGHV3-9P01782 118 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 DIO1P49895 249 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 GNMTQ14749 295 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 RBMS2Q15434 407 aaKnown RBP10.69□□□□□ -0.7
SYNPO-204ENST00000519664 PRTGQ2VWP7 1150 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 C12orf73Q69YU5 71 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 STEAP1BQ6NZ63 245 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 Q6ZTK2 550 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 OR14A16Q8NHC5 309 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 SLC2A12Q8TD20 617 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 ST8SIA2Q92186 375 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 OR2A14Q96R47 310 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 PCDHGA1Q9Y5H4 931 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 CCSO14618 274 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 IGHA2P01877 340 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 CDK2P24941 298 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 AFF3P51826 1226 aaKnown RBP10.69□□□□□ -0.7
SYNPO-204ENST00000519664 HMGA2P52926 109 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 DCAF7P61962 342 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 ABHD17BQ5VST6 288 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 TP53I13Q8NBR0 393 aaPredicted RBP10.69□□□□□ -0.7
SYNPO-204ENST00000519664 C7orf50Q9BRJ6 194 aaKnown RBP10.69□□□□□ -0.7
SYNPO-204ENST00000519664 C20orf85Q9H1P6 137 aa10.69□□□□□ -0.7
SYNPO-204ENST00000519664 KCNG2Q9UJ96 466 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms