RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ZNF493Q6ZR52 646 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 LINC00173Q6ZV60 143 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 LIX1Q8N485 282 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 B3GNT7Q8NFL0 401 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 OR4S2Q8NH73 311 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 WFIKKN1Q96NZ8 548 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 PLIN2Q99541 437 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 PARP12Q9H0J9 701 aaKnown RBP2.74□□□□□ -1.97
SQLE-202ENST00000518604 RPF2Q9H7B2 306 aaKnown RBP2.74□□□□□ -1.97
SQLE-202ENST00000518604 CSDC2Q9Y534 153 aaKnown RBP2.74□□□□□ -1.97
SQLE-202ENST00000518604 USP47Q96K76 1375 aa2.74□□□□□ -1.97
SQLE-202ENST00000518604 ARHGAP21Q5T5U3 1957 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 KMOO15229 486 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 ZNF324O75467 553 aaPredicted RBP2.73□□□□□ -1.97
SQLE-202ENST00000518604 SNX4O95219 450 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 WISP3O95389 354 aaPredicted RBP2.73□□□□□ -1.97
SQLE-202ENST00000518604 RAB3DO95716 219 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 FGGP02679 453 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 RETP07949 1114 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 CALM1P0DP23 149 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 CALM2P0DP24 149 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 CALM3P0DP25 149 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 TROVE2P10155 538 aaKnown RBP eCLIP2.73□□□□□ -1.97
SQLE-202ENST00000518604 IGFBP3P17936 291 aaPredicted RBP2.73□□□□□ -1.97
SQLE-202ENST00000518604 HRH1P35367 487 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 CCNHP51946 323 aaPredicted RBP2.73□□□□□ -1.97
SQLE-202ENST00000518604 NCBP2P52298 156 aaKnown RBP eCLIP2.73□□□□□ -1.97
SQLE-202ENST00000518604 YWHAGP61981 247 aaKnown RBP eCLIP2.73□□□□□ -1.97
SQLE-202ENST00000518604 PON3Q15166 354 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 OR52W1Q6IF63 320 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 IGFL3Q6UXB1 125 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 CERS6Q6ZMG9 384 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 TEX43Q6ZNM6 134 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 C19orf35Q6ZS72 473 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 HDDC2Q7Z4H3 204 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 FAM228AQ86W67 206 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 SLC22A9Q8IVM8 553 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 PDIK1LQ8N165 341 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 MS4A15Q8N5U1 240 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 OR56B2PQ8NGI1 322 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 OR10R2Q8NGX6 335 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 AKR7LQ8NHP1 331 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 RASD2Q96D21 266 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 BMFQ96LC9 184 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 PLA2G2FQ9BZM2 168 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 RPP21Q9H633 154 aaKnown RBP2.73□□□□□ -1.97
SQLE-202ENST00000518604 CWH43Q9H720 699 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 NOX3Q9HBY0 568 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 SLC40A1Q9NP59 571 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 CYTL1Q9NRR1 136 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 PISDQ9UG56 409 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 KIAA1257Q9ULG3 409 aa2.73□□□□□ -1.97
SQLE-202ENST00000518604 MN1Q10571 1320 aaPredicted RBP2.72□□□□□ -1.97
SQLE-202ENST00000518604 IGLV4-60A0A075B6I1 120 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 IGKV2-28A0A075B6P5 120 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 HEATR9A2RTY3 570 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 UBXN8O00124 270 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 CDC7O00311 574 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 EEDO75530 441 aaKnown RBP2.72□□□□□ -1.97
SQLE-202ENST00000518604 WBP4O75554 376 aaKnown RBP2.72□□□□□ -1.97
SQLE-202ENST00000518604 IGKV2D-28P01615 120 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 RFX3P48380 749 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 LRRC74AQ0VAA2 488 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 ECH1Q13011 328 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 FAM71E1Q6IPT2 247 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 STPG2Q8N412 459 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 EID2Q8N6I1 236 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 HSD17B11Q8NBQ5 300 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 OR1S2Q8NGQ3 325 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 N4BP2L2Q92802 583 aaPredicted RBP2.72□□□□□ -1.97
SQLE-202ENST00000518604 ISYNA1Q9NPH2 558 aa2.72□□□□□ -1.97
SQLE-202ENST00000518604 ZNF629Q9UEG4 869 aaPredicted RBP2.72□□□□□ -1.97
SQLE-202ENST00000518604 SCN2AQ99250 2005 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 MAPK8IP3Q9UPT6 1336 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 IGHV5-51A0A0C4DH38 117 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 CCDC169A6NNP5 214 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 ZNF716A6NP11 495 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 HIDE1A8MVS5 230 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 INS-IGF2F8WCM5 200 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 DFNA5O60443 496 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 CIB2O75838 187 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 UTS2O95399 124 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 UQCRFS1P1P0C7P4 283 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 ZNF735P0CB33 412 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 RPS9P46781 194 aaKnown RBP2.71□□□□□ -1.98
SQLE-202ENST00000518604 ADARB1P78563 741 aaKnown RBP2.71□□□□□ -1.98
SQLE-202ENST00000518604 TWF1Q12792 350 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 PTGES3Q15185 160 aaKnown RBP2.71□□□□□ -1.98
SQLE-202ENST00000518604 POU2AF1Q16633 256 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 CCNJQ5T5M9 372 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 HES5Q5TA89 166 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 ANKRD22Q5VYY1 191 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 FAM92BQ6ZTR7 304 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 OAFQ86UD1 273 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 FAM86B1Q8N7N1 296 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 NOXO1Q8NFA2 376 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 OR7G2Q8NG99 324 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 CREB3L1Q96BA8 519 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 FAM3DQ96BQ1 224 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 CCDC126Q96EE4 140 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms