RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 NKX1-2Q9UD57 310 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 SEC14L3Q9UDX4 400 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 BTNL2Q9UIR0 455 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 BOKQ9UMX3 212 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 NTNG1Q9Y2I2 539 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CHCHD2Q9Y6H1 151 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 KCNE3Q9Y6H6 103 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CEPT1Q9Y6K0 416 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 A0A1W2PP18 115 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PINLYPA6NC86 204 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TMEM247A6NEH6 219 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ANKUB1A6NFN9 424 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR6C70A6NIJ9 312 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 C12orf71A8MTZ7 269 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 EVPLLA8MZ36 301 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TEX46H3BTG2 121 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 J3QKU1 62 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNHIT1O43257 154 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TSPAN2O60636 221 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CCDC22O60826 627 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SCN2BO60939 215 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ATP6V1G1O75348 118 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CBR3O75828 277 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 WISP2O76076 250 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SOX30O94993 753 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PSMG1O95456 288 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CLPTM1O96005 669 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 IGKV1D-16P01601 117 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 RFPL3SP0C7P2 107 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR12D1P0DN82 309 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PLA2G2AP14555 144 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CD1EP15812 388 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SRMP19623 302 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PTNP21246 168 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 GDF1P27539 372 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MAGEA5P43359 124 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 GPR4P46093 362 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CCR4P51679 360 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 IRX1P78414 480 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 HPCAP84074 193 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SLC25A3Q00325 362 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 HSF1Q00613 529 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SNTA1Q13424 505 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CYLC2Q14093 348 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 SLC10A1Q14973 349 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CARTPTQ16568 116 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 EIF2S3LQ2VIR3 472 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 DCST2Q5T1A1 773 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 LCN1P1Q5VSP4 162 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SAXO2Q658L1 398 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CGB2Q6NT52 195 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF704Q6ZNC4 412 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 YRDCQ86U90 279 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 MARCH3Q86UD3 253 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 IGFN1Q86VF2 1251 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FUNDC1Q8IVP5 155 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 C1orf87Q8N0U7 546 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 UBE2J2Q8N2K1 259 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF614Q8N883 585 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 GATSQ8NAP1 163 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR9K2Q8NGE7 335 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR4C3Q8NH37 302 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR4A16Q8NH70 328 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PAQR8Q8TEZ7 354 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 GTF2H4Q92759 462 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 RAB8BQ92930 207 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 HGDQ93099 445 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SLCO4A1Q96BD0 722 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NEURL3Q96EH8 262 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 AURKBQ96GD4 344 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF597Q96LX8 424 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR7D2Q96RA2 312 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SIGLEC11Q96RL6 698 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 STACQ99469 402 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 DDOQ99489 341 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FEVQ99581 238 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 COQ7Q99807 217 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SPAG8Q99932 426 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 ALG12Q9BV10 488 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OSBPL11Q9BXB4 747 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ANGPTL4Q9BY76 406 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TTTY12Q9BZ98 90 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MEGF9Q9H1U4 602 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PIGUQ9H490 435 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 RAD21L1Q9H4I0 556 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CACYBPQ9HB71 228 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 DUSP22Q9NRW4 184 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 EXD2Q9NVH0 621 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TUBA8Q9NY65 449 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 FLRT3Q9NZU0 649 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PPP4R1LQ9P1A2 415 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ARMCX1Q9P291 453 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FOXA2Q9Y261 457 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 NDUFAF1Q9Y375 327 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TLN1Q9Y490 2541 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF462Q96JM2 2506 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FER1L5A0AVI2 2057 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SPTA1P02549 2419 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FAM208BQ5VWN6 2430 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 A0A096LPI6 279 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms