RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 PACSIN2Q9UNF0 486 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40.13-201ENST00000516379 ASXL3Q9C0F0 2248 aa-1.6□□□□□ -2.67
SNORA40.13-201ENST00000516379 BRCA1P38398 1863 aaKnown RBP-1.6□□□□□ -2.67
SNORA40.13-201ENST00000516379 ITIH6Q6UXX5 1313 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 ASH1LQ9NR48 2969 aaKnown RBP-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 KMT2CQ8NEZ4 4911 aaKnown RBP-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 IGHV3-72A0A0B4J1Y9 119 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 ERICH4A6NGS2 130 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 FAM47DPA6NHR8 397 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 ZNF208O43345 1280 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 REM1O75628 298 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 ANXA3P12429 323 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 ZNF708P17019 499 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CTRB1P17538 263 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CCR8P51685 355 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 PRMT2P55345 433 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 TSPY1Q01534 308 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 MERTKQ12866 999 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 NME3Q13232 169 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 BTG3Q14201 252 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CST6Q15828 149 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 ZNF77Q15935 545 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 SLC15A2Q16348 729 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CCDC158Q5M9N0 1113 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 C10orf91Q5T1B1 145 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 Q6ZRU5 148 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CCDC83Q8IWF9 413 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 MRPL43Q8N983 215 aaKnown RBP-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 NHLRC2Q8NBF2 726 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 SLC26A10Q8NG04 563 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 OR11H7Q8NGC8 314 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 LKAAEAR1Q8TD35 194 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 TIMM17AQ99595 171 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 RSG1Q9BU20 258 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 SPZ1Q9BXG8 430 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CCDC68Q9H2F9 335 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 NUDT15Q9NV35 164 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CYP39A1Q9NYL5 469 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 CTNNA3Q9UI47 895 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 HYOU1Q9Y4L1 999 aa-1.61□□□□□ -2.67
SNORA40.13-201ENST00000516379 LOC110117498-PIK3R3F6TDL0 507 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 IL9P15248 144 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 IL11P20809 199 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 FGF9P31371 208 aaPredicted RBP-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 SERPINB6P35237 376 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 CLNS1AP54105 237 aaKnown RBP-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 CCZ1BP86790 482 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 CCZ1P86791 482 aaPredicted RBP-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 TFCP2Q12800 502 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 MICBQ29980 383 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 LDLRAD2Q5SZI1 272 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 LIN9Q5TKA1 542 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 FAM131AQ6UXB0 335 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 SYT10Q6XYQ8 523 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 C4orf50Q6ZRC1 276 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 CCDC186Q7Z3E2 898 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 STKLD1Q8NE28 680 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 PHYHIPQ92561 330 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 MRPS31Q92665 395 aaKnown RBP-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 PTX4Q96A99 478 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 SEC22AQ96IW7 307 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 DNAJC30Q96LL9 226 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 GPR82Q96P67 336 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 MRPL45Q9BRJ2 306 aaKnown RBP-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 TRPV6Q9H1D0 765 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 TRPV5Q9NQA5 729 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 AATFQ9NY61 560 aaKnown RBP eCLIP-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 HMGXB4Q9UGU5 601 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 CSDC2Q9Y534 153 aaKnown RBP-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 NUP205Q92621 2012 aa-1.62□□□□□ -2.67
SNORA40.13-201ENST00000516379 PXDNLA1KZ92 1463 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 CNTRLQ7Z7A1 2325 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 HERC1Q15751 4861 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 C13orf42A0A1B0GVH6 325 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 MBLAC1A4D2B0 266 aaPredicted RBP-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 CRCPO75575 148 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 NDUFA7O95182 113 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 F10P00742 488 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 LGALS2P05162 132 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 CD28P10747 220 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 ZNF138P52744 262 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 HSPA2P54652 639 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 ASIC1P78348 528 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 ELF3P78545 371 aaPredicted RBP-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 PRPSAP1Q14558 356 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 CHI3L2Q15782 390 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 ORMDL2Q53FV1 153 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 HECTD3Q5T447 861 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 C12orf60Q5U649 245 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 RPUSD3Q6P087 351 aaKnown RBP-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 PLET1Q6UQ28 207 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 FBXW12Q6X9E4 464 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 PAGE2Q7Z2X7 111 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 HDDC2Q7Z4H3 204 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 SLC25A44Q96H78 314 aaPredicted RBP-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 SLC30A2Q9BRI3 323 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 TBL1XR1Q9BZK7 514 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 RHBGQ9H310 441 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 RABEP2Q9H5N1 569 aa-1.63□□□□□ -2.67
SNORA40.13-201ENST00000516379 BLOC1S4Q9NUP1 217 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms