RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MDH1P40925 334 aaKnown RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 GUCA1AP43080 201 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 RAD52P43351 418 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 CHN2P52757 468 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 HSF2Q03933 536 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 LIPEQ05469 1076 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 RUNX1T1Q06455 604 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 LAPTM4AQ15012 233 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 TAF11Q15544 211 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 FXNQ16595 210 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 HIST3H3Q16695 136 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 TBC1D28Q2M2D7 210 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 ALG10Q5BKT4 473 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 RGS7BPQ6MZT1 257 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 FKBP9P1Q75LS8 142 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 CXXC5Q7LFL8 322 aaKnown RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 LRRC18Q8N456 261 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 RBM15BQ8NDT2 890 aaKnown RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 MOSPD2Q8NHP6 518 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 FGFBP3Q8TAT2 258 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 LIPHQ8WWY8 451 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 BPIFA2Q96DR5 249 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 RBP7Q96R05 134 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 MRPL13Q9BYD1 178 aaKnown RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 CHODLQ9H9P2 273 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 CCNB1IP1Q9NPC3 277 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 CMTM6Q9NX76 183 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF346Q9UL40 294 aaKnown RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 FZR1Q9UM11 496 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 ZANQ9Y493 2812 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 PLCE1Q9P212 2302 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 CXCR6O00574 342 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 TGFAP01135 160 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 LCKP06239 509 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 TCN1P20061 433 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-215ENST00000515516 APLNRP35414 380 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 ALDH3B1P43353 468 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 YAP1P46937 504 aaKnown RBP11.76□□□□□ -0.53
TCOF1-215ENST00000515516 CD47Q08722 323 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 TOP3AQ13472 1001 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-215ENST00000515516 TRAM2Q15035 370 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 SGCAQ16586 387 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 NKPD1Q17RQ9 610 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 ARMC4Q5T2S8 1044 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 UGT2A3Q6UWM9 527 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF584Q8IVC4 421 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 SLC15A3Q8IY34 581 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 GEMIN6Q8WXD5 167 aaKnown RBP11.76□□□□□ -0.53
TCOF1-215ENST00000515516 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 MSI2Q96DH6 328 aaKnown RBP11.76□□□□□ -0.53
TCOF1-215ENST00000515516 TXNIPQ9H3M7 391 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 SIAEQ9HAT2 523 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 SMURF2Q9HAU4 748 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 A4GNTQ9UNA3 340 aa11.76□□□□□ -0.53
TCOF1-215ENST00000515516 ALPK2Q86TB3 2170 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 LRP5LA4QPB2 252 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 NPIPB13A6NJU9 1138 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 RNF212BA8MTL3 300 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 NPIPB4C9JG80 1138 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 PIP5K1CO60331 668 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 FAM157BP0CG42 384 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 CCL2P13500 99 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 APEX1P27695 318 aaKnown RBP11.75□□□□□ -0.53
TCOF1-215ENST00000515516 SLC7A2P52569 658 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 CTXN1P60606 82 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 MOGQ16653 247 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 ANKDD1AQ495B1 522 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 IFI44LQ53G44 452 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 C10orf128Q5T292 105 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 FAM205BPQ63HN1 556 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 UNQ6126/PRO20091Q6UXV3 157 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF730Q6ZMV8 503 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 VTCN1Q7Z7D3 282 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 OAFQ86UD1 273 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 LRP11Q86VZ4 500 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 CYP4Z1Q86W10 505 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 ICA1LQ8NDH6 482 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 SYNPRQ8TBG9 265 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 FNDC8Q8TC99 324 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 SNX33Q8WV41 574 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 NSMAFQ92636 917 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 RDH5Q92781 318 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 HPS1Q92902 700 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 FAM162AQ96A26 154 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 SEPHS2Q99611 448 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 ALG12Q9BV10 488 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 BCL2L14Q9BZR8 327 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 NDEL1Q9GZM8 345 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 OR51B6Q9H340 312 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 TAAR3PQ9P1P4 343 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 RHCGQ9UBD6 479 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 EIF3KQ9UBQ5 218 aaKnown RBP11.75□□□□□ -0.53
TCOF1-215ENST00000515516 HIF3AQ9Y2N7 669 aa11.75□□□□□ -0.53
TCOF1-215ENST00000515516 HEATR1Q9H583 2144 aaKnown RBP11.75□□□□□ -0.53
TCOF1-215ENST00000515516 A6NIZ1 184 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 EFCAB9A8MZ26 197 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 GMNNO75496 209 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 SLC2A10O95528 541 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms