RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF514Q96K75 400 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 LINC00615Q96LM1 132 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 SELENOIQ9C0D9 397 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ZDHHC4Q9NPG8 344 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 C19orf12Q9NSK7 152 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 PARPBPQ9NWS1 579 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 TAC3Q9UHF0 121 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 TP53TG5Q9Y2B4 290 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 TMEM184BQ9Y519 407 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 VWA8A3KMH1 1905 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
SMAD1-215ENST00000515385 LOC100289279A0A1B0GTE1 492 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CPED1A4D0V7 1026 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 FAM157AC9JC47 383 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CCSO14618 274 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CYB5AP00167 134 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CRYABP02511 175 aaKnown RBP11.65□□□□□ -0.54
SMAD1-215ENST00000515385 DBIP07108 87 aaKnown RBP11.65□□□□□ -0.54
SMAD1-215ENST00000515385 TACR3P29371 465 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 MC3RP41968 323 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CASP6P55212 293 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 RAB1AP62820 205 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 NR0B2Q15466 257 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CEBPEQ15744 281 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 FAM110CQ1W6H9 321 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 KRBOX4Q5JUW0 171 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 DHRS11Q6UWP2 260 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 BTNL8Q6UX41 500 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 HIST2H3AQ71DI3 136 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF595Q8IYB9 648 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 BPIFB2Q8N4F0 458 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 COMMD1Q8N668 190 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 AMER3Q8N944 861 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF383Q8NA42 475 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 MYLIPQ8WY64 445 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 SLAMF9Q96A28 289 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 RSPRY1Q96DX4 576 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 S100A13Q99584 98 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 GPR61Q9BZJ8 451 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 METTL9Q9H1A3 318 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 LMAN1LQ9HAT1 526 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 PARP11Q9NR21 331 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 DUSP22Q9NRW4 184 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CHRNA9Q9UGM1 479 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 FBXO4Q9UKT5 387 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 ADAM18Q9Y3Q7 739 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 CSAG2Q9Y5P2 127 aa11.65□□□□□ -0.54
SMAD1-215ENST00000515385 COL4A3Q01955 1670 aa11.65□□□□□ -0.55
SMAD1-215ENST00000515385 TBC1D3DA0A087WVF3 549 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 TBC1D3IA0A087WXS9 549 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 A0A0A6YYH2 397 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 A0A0B4J2A0 478 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 C7orf77A4D0Y5 90 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 A6NJ64 397 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 A6NLC8 198 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 ZNF736B4DX44 427 aaPredicted RBP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 TBC1D3LB9A6J9 549 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 TAAR5O14804 337 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 OR1F1O43749 312 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 HKR1P10072 659 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 F3P13726 295 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 PTNP21246 168 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 GSK3AP49840 483 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 ELOCQ15369 112 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 RHEBQ15382 184 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 RAB11BQ15907 218 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 FNDC3BQ53EP0 1204 aaKnown RBP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 MORN1Q5T089 497 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 THEM4Q5T1C6 240 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 TBC1D3CQ6IPX1 549 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 SLC48A1Q6P1K1 146 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 TBC1D3Q8IZP1 549 aaPredicted RBP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 ARRDC1Q8N5I2 433 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 OR56B1Q8NGI3 324 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 OR2G2Q8NGZ5 317 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 ZNF461Q8TAF7 563 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 SEH1LQ96EE3 360 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 IL17FQ96PD4 163 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 TNFRSF13CQ96RJ3 184 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 MAP3K3Q99759 626 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 CHST5Q9GZS9 411 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 GAR1Q9NY12 217 aaKnown RBP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 SHPKQ9UHJ6 478 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 PLXND1Q9Y4D7 1925 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 EP400Q96L91 3159 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 GRM6O15303 877 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 MBTPS2O43462 519 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 IFNA2P01563 188 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 LYL1P12980 280 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 RPS4Y1P22090 263 aaKnown RBP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 AQP2P41181 271 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 HNRNPKP61978 463 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMAD1-215ENST00000515385 PLA2G7Q13093 441 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 PYY3Q5JQD4 70 aa11.64□□□□□ -0.55
SMAD1-215ENST00000515385 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms