RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CCNIQ14094 377 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 KEAP1Q14145 624 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 GK3PQ14409 553 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 MESTQ5EB52 335 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 C10orf128Q5T292 105 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 GPR139Q6DWJ6 353 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SLC22A25Q6T423 547 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 PAMR1Q6UXH9 720 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 ZNF620Q6ZNG0 422 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 OR10G2Q8NGC3 310 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 FNDC8Q8TC99 324 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SLC38A2Q96QD8 506 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 SH3GL3Q99963 347 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 IFT27Q9BW83 186 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 EGLN3Q9H6Z9 239 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 B3GNT2Q9NY97 397 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 DNAJB9Q9UBS3 223 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 MGAT4BQ9UQ53 548 aa12.16□□□□□ -0.46
USP46-209ENST00000514536 IGHV1-18A0A0C4DH31 117 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 SLC22A23A1A5C7 686 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 PRSS37A4D1T9 235 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 HS3ST1O14792 307 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 E2F6O75461 281 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 RAF1P04049 648 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 DNASE1P24855 282 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 KRR1Q13601 381 aaKnown RBP12.15□□□□□ -0.46
USP46-209ENST00000514536 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
USP46-209ENST00000514536 RASSF6Q6ZTQ3 369 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 RADILQ96JH8 1075 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 FEVQ99581 238 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 DGCR6LQ9BY27 220 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 SMURF2Q9HAU4 748 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 ZNF224Q9NZL3 707 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 PDP1Q9P0J1 537 aaPredicted RBP12.15□□□□□ -0.46
USP46-209ENST00000514536 CRNNQ9UBG3 495 aaPredicted RBP12.15□□□□□ -0.46
USP46-209ENST00000514536 UGT2A1Q9Y4X1 527 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 AKAP6Q13023 2319 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 POLQO75417 2590 aa12.15□□□□□ -0.46
USP46-209ENST00000514536 IMPA2O14732 288 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 ATE1O95260 518 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 FARS2O95363 451 aaKnown RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 TXNDC12O95881 172 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 IGLV1-44P01699 117 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 IGFBP1P08833 259 aaPredicted RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 CELA3BP08861 270 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 CECR9P0C854 216 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 APEHP13798 732 aaKnown RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 PRKACGP22612 351 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 ARR3P36575 388 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 CDKN2AP42771 156 aaKnown RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 PTDSS1P48651 473 aaKnown RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 IDH3GP51553 393 aaPredicted RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 RAB1AP62820 205 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 NPRL3Q12980 569 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 ETFDHQ16134 617 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 SGCAQ16586 387 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 CLEC12AQ5QGZ9 265 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 PTCHD4Q6ZW05 846 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 DEPDC4Q8N2C3 294 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 LRRC18Q8N456 261 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 FAM169BQ8N8A8 192 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 NANOS1Q8WY41 292 aaKnown RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 NIPSNAP1Q9BPW8 284 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 SEC61A2Q9H9S3 476 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 NOX3Q9HBY0 568 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 MOV10Q9HCE1 1003 aaKnown RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
USP46-209ENST00000514536 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 MOKQ9UQ07 419 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 AP4S1Q9Y587 144 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 ATP23Q9Y6H3 246 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 CDH10Q9Y6N8 788 aa12.14□□□□□ -0.47
USP46-209ENST00000514536 ARPC3O15145 178 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 AHCYL1O43865 530 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 ENTPD5O75356 428 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 UBL3O95164 117 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 IGKV3-15P01624 115 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 CD53P19397 219 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 NPR2P20594 1047 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 GSTM3P21266 225 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 GIPRP48546 466 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 CDH11P55287 796 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
USP46-209ENST00000514536 C3orf36Q3SXR2 165 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 SLC35F1Q5T1Q4 408 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 RPL13AP3Q6NVV1 102 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 SLC16A14Q7RTX9 510 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
USP46-209ENST00000514536 HS3ST5Q8IZT8 346 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 ZNF611Q8N823 705 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 OR52L1Q8NGH7 329 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 NINJ1Q92982 152 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 FBXW5Q969U6 566 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 KCNS3Q9BQ31 491 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 PLA2G12AQ9BZM1 189 aa12.13□□□□□ -0.47
USP46-209ENST00000514536 SYT4Q9H2B2 425 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms