RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 SMURF2Q9HAU4 748 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 TAS2R16Q9NYV7 291 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 GLTPQ9NZD2 209 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 REV1Q9UBZ9 1251 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 IL20RAQ9UHF4 553 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 GPR52Q9Y2T5 361 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 RPL36A-HNRNPH2H7BZ11 118 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 EI24O14681 340 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 MGRN1O60291 552 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 MPGP29372 298 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 CD79BP40259 229 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 GIPRP48546 466 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 ZNF84P51523 738 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 FXYD6P3P58550 94 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 CD47Q08722 323 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 KRR1Q13601 381 aaKnown RBP17.74■□□□□ 0.43
USP53-208ENST00000514305 C1QTNF12Q5T7M4 302 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 OR7E24Q6IFN5 339 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 FAM122BQ7Z309 247 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 LSRQ86X29 649 aaPredicted RBP17.74■□□□□ 0.43
USP53-208ENST00000514305 TMEM123Q8N131 208 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 LNX2Q8N448 690 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 NOXO1Q8NFA2 376 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 STEAP2Q8NFT2 490 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 MBD6Q96DN6 1003 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 PLEKHA8Q96JA3 519 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 Q96M85 177 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 DACH2Q96NX9 599 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 SLC38A2Q96QD8 506 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 OR10A4Q9H209 315 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 SLC7A10Q9NS82 523 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 PRSS50Q9UI38 385 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 ABCA4P78363 2273 aa17.74■□□□□ 0.43
USP53-208ENST00000514305 ZFHX3Q15911 3703 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 MAP1AP78559 2803 aaPredicted RBP17.73■□□□□ 0.43
USP53-208ENST00000514305 TEX13CA0A0J9YWL9 993 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 CIB4A0PJX0 185 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 SH3D21A4FU49 640 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 M0R3G1 203 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 CASKO14936 926 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 ALPLP05186 524 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 PGA4P0DJD7 388 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 PGA3P0DJD8 388 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 PAX7P23759 505 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 GRK5P34947 590 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 ZNF474Q6S9Z5 364 aaPredicted RBP17.73■□□□□ 0.43
USP53-208ENST00000514305 ZNF519Q8TB69 540 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 KISS1RQ969F8 398 aaPredicted RBP17.73■□□□□ 0.43
USP53-208ENST00000514305 TMEM54Q969K7 222 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 MRPL13Q9BYD1 178 aaKnown RBP17.73■□□□□ 0.43
USP53-208ENST00000514305 NDRG3Q9UGV2 375 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 ADAM18Q9Y3Q7 739 aa17.73■□□□□ 0.43
USP53-208ENST00000514305 MTORP42345 2549 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 RIIAD1A6NNX1 92 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 C16orf97H3BN30 126 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 BHLHE40O14503 412 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 SOCS2O14508 198 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 CASQ2O14958 399 aaPredicted RBP17.72■□□□□ 0.43
USP53-208ENST00000514305 PPP3CBP16298 524 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 ZNF26P17031 533 aaPredicted RBP17.72■□□□□ 0.43
USP53-208ENST00000514305 ZNF3P17036 446 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 PSMB1P20618 241 aaKnown RBP17.72■□□□□ 0.43
USP53-208ENST00000514305 PAICSP22234 425 aaKnown RBP17.72■□□□□ 0.43
USP53-208ENST00000514305 IL32P24001 234 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 CRABP1P29762 137 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 HOXC12P31275 282 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 NTF4P34130 210 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 ROR2Q01974 943 aaKnown RBP17.72■□□□□ 0.43
USP53-208ENST00000514305 NPRL3Q12980 569 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 GINS1Q14691 196 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 PGGHGQ32M88 737 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 GABRG1Q8N1C3 465 aa17.72■□□□□ 0.43
USP53-208ENST00000514305 REPIN1Q9BWE0 567 aaKnown RBP17.72■□□□□ 0.43
USP53-208ENST00000514305 PRSS37A4D1T9 235 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 UPK3AO75631 287 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 IGHV3-9P01782 118 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 QDPRP09417 244 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 CDK5Q00535 292 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 DEFB113Q30KQ7 82 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 SFRP5Q5T4F7 317 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.71■□□□□ 0.43
USP53-208ENST00000514305 P2RY8Q86VZ1 359 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 CCDC36Q8IYA8 594 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 SYT14Q8NB59 555 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 C1orf162Q8NEQ5 155 aaPredicted RBP17.71■□□□□ 0.43
USP53-208ENST00000514305 HDAC2Q92769 488 aaKnown RBP17.71■□□□□ 0.43
USP53-208ENST00000514305 RASD2Q96D21 266 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 PLA2G12AQ9BZM1 189 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 RIBC2Q9H4K1 309 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 SLC25A19Q9HC21 320 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 CRLF2Q9HC73 371 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 GPR35Q9HC97 309 aa17.71■□□□□ 0.43
USP53-208ENST00000514305 TMEFF2Q9UIK5 374 aaPredicted RBP17.71■□□□□ 0.43
USP53-208ENST00000514305 DHHO43323 396 aa17.7■□□□□ 0.42
USP53-208ENST00000514305 ATE1O95260 518 aa17.7■□□□□ 0.42
USP53-208ENST00000514305 HRGP04196 525 aa17.7■□□□□ 0.42
USP53-208ENST00000514305 TP53P04637 393 aaPredicted RBP17.7■□□□□ 0.42
USP53-208ENST00000514305 PTGES3Q15185 160 aaKnown RBP17.7■□□□□ 0.42
USP53-208ENST00000514305 HIST3H3Q16695 136 aa17.7■□□□□ 0.42
USP53-208ENST00000514305 MESTQ5EB52 335 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms