RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 HTR2AP28223 471 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 MPV17P39210 176 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 BIDP55957 195 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 BTG1P62324 171 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 BEAN1Q3B7T3 259 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 ZNF718Q3SXZ3 478 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 SLC36A2Q495M3 483 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 NRN1LQ496H8 165 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 PDCD4Q53EL6 469 aaKnown RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 ESCO2Q56NI9 601 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 ALG10BQ5I7T1 473 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 MBNL2Q5VZF2 373 aaKnown RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 LRFN4Q6PJG9 635 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 LRRC28Q86X40 367 aaPredicted RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 TMEM86BQ8N661 226 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 OR4K5Q8NGD3 323 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 EPS8L3Q8TE67 593 aaKnown RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 DNAJA4Q8WW22 397 aaPredicted RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 MARS2Q96GW9 593 aaKnown RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 TMEM19Q96HH6 336 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 PPP1R36Q96LQ0 422 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 MOGAT1Q96PD6 335 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 DCLRE1CQ96SD1 692 aaKnown RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 EPYCQ99645 322 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 CHIAQ9BZP6 476 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 LRMDAQ9H2I8 198 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 RNF121Q9H920 327 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 GRPEL1Q9HAV7 217 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 CACYBPQ9HB71 228 aaKnown RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 TMEM106BQ9NUM4 274 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 IL20RAQ9UHF4 553 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 ZDHHC8Q9ULC8 765 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 LRCH1Q9Y2L9 728 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 RNF114Q9Y508 228 aa9.19□□□□□ -0.94
DDX41-216ENST00000513562 NUP214P35658 2090 aaPredicted RBP9.19□□□□□ -0.94
DDX41-216ENST00000513562 IQCMA0A1B0GVH7 501 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 LRRN3E7EW58 273 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 DHHO43323 396 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 SERPINI2O75830 405 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 MMP7P09237 267 aaPredicted RBP9.18□□□□□ -0.94
DDX41-216ENST00000513562 AHCYP23526 432 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 LIPAP38571 399 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 WNT5AP41221 380 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 PROK1P58294 105 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 DSTNP60981 165 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 RPL15P61313 204 aaKnown RBP9.18□□□□□ -0.94
DDX41-216ENST00000513562 PLP2Q04941 152 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 LRRC74AQ0VAA2 488 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 ZMYND11Q15326 602 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 SPATA46Q5T0L3 261 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 THEM4Q5T1C6 240 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 KPRPQ5T749 579 aaPredicted RBP9.18□□□□□ -0.94
DDX41-216ENST00000513562 FAM91A1Q658Y4 838 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 ULK3Q6PHR2 472 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 BTNL3Q6UXE8 466 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 LRRN1Q6UXK5 716 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 Q6YL49 198 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 SLC16A14Q7RTX9 510 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 ZNF101Q8IZC7 436 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 ZNF283Q8N7M2 679 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 RBM15BQ8NDT2 890 aaKnown RBP9.18□□□□□ -0.94
DDX41-216ENST00000513562 OR10S1Q8NGN2 331 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 OR6X1Q8NH79 312 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 LINC01006Q8NI28 216 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 KLF14Q8TD94 323 aaPredicted RBP9.18□□□□□ -0.94
DDX41-216ENST00000513562 ZDHHC16Q969W1 377 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 DACT3Q96B18 629 aaPredicted RBP9.18□□□□□ -0.94
DDX41-216ENST00000513562 OR52E6Q96RD3 313 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 SIGLEC11Q96RL6 698 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 SLC30A2Q9BRI3 323 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 WNK1Q9H4A3 2382 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 MARCH7Q9H992 704 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 NOX4Q9NPH5 578 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 TNFRSF19Q9NS68 423 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 SLC6A13Q9NSD5 602 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 KLHL21Q9UJP4 597 aa9.18□□□□□ -0.94
DDX41-216ENST00000513562 IGHV2-70DA0A0C4DH43 119 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 CEACAM18A8MTB9 384 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 C3orf80F5H4A9 247 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 RFXANKO14593 260 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 ERLIN1O75477 346 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 TGDSO95455 350 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 IL12AP29459 219 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 APLNRP35414 380 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 RBMXP38159 391 aaKnown RBP9.17□□□□□ -0.94
DDX41-216ENST00000513562 CRATP43155 626 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 UFM1P61960 85 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 TNFAIP6P98066 277 aaPredicted RBP9.17□□□□□ -0.94
DDX41-216ENST00000513562 ZMAT1Q5H9K5 638 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 ZNF774Q6NX45 483 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 BRD3OSQ6XYD6 125 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 IFT20Q8IY31 132 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 POU5F2Q8N7G0 328 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 ZNF781Q8N8C0 355 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 MNS1Q8NEH6 495 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 FAM110DQ8TAY7 271 aaPredicted RBP9.17□□□□□ -0.94
DDX41-216ENST00000513562 SLC25A40Q8TBP6 338 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 ZNF566Q969W8 418 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 SLC47A1Q96FL8 570 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 SLC25A44Q96H78 314 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms