RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FBXO6Q9NRD1 293 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 CENPMQ9NSP4 180 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 DCAF13Q9NV06 445 aaKnown RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 SMOXQ9NWM0 555 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 C1orf123Q9NWV4 160 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 NINJ2Q9NZG7 142 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 STOX2Q9P2F5 926 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 IL20RAQ9UHF4 553 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 ATP6V1HQ9UI12 483 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 MGAT4BQ9UQ53 548 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 SNX24Q9Y343 169 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 SAR1BQ9Y6B6 198 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 DOCK4Q8N1I0 1966 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 ASCC3Q8N3C0 2202 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 TRBV7-9A0A0J9YWB2 115 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 A0A0J9YY10 115 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 SLC5A10A0PJK1 596 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 USP27XA6NNY8 438 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 C9J4A7 227 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 H3BMH7 237 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 MKRN2OSH3BPM6 223 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 J3QKU1 62 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CASKO14936 926 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 NIPSNAP2O75323 286 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 VPS26AO75436 327 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 BANF1O75531 89 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 STATHP02808 62 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CATP04040 527 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 HCKP08631 526 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 HBQ1P09105 142 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 UGT2B7P16662 529 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 TCP1P17987 556 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 TPSB2P20231 275 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CCNA2P20248 432 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CD9P21926 228 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 F8A1P23610 371 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PTPN4P29074 926 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CMPK1P30085 196 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 VSX2P58304 361 aaPredicted RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 DR1Q01658 176 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 NAAAQ02083 359 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CDC20Q12834 499 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PDIA2Q13087 525 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 CUL1Q13616 776 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 TPSAB1Q15661 275 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PCK2Q16822 640 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 KLHL38Q2WGJ6 581 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 C15orf32Q32M92 178 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 TTLL9Q3SXZ7 439 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 WDR25Q64LD2 544 aaPredicted RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 ZNF470Q6ECI4 717 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 REG3GQ6UW15 175 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 SPESP1Q6UW49 350 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 ATRAIDQ6UW56 229 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 SYT10Q6XYQ8 523 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 SHISA6Q6ZSJ9 500 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 TMEM135Q86UB9 458 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 LRRC6Q86X45 466 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CDC20BQ86Y33 519 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PDIK1LQ8N165 341 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 TTC29Q8NA56 475 aaPredicted RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 FAM71CQ8NEG0 241 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 OR5K2Q8NHB8 316 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 ZNF671Q8TAW3 534 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 LKAAEAR1Q8TD35 194 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 MCOLN3Q8TDD5 553 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 ACTRT1Q8TDG2 376 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 NCLNQ969V3 563 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CATSPER2Q96P56 530 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 KIFC1Q9BW19 673 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 RAB33BQ9H082 229 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 GNB4Q9HAV0 340 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 FAM60AQ9NP50 221 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 MRPS30Q9NP92 439 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 LHX9Q9NQ69 397 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 YAE1D1Q9NRH1 226 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 FAM114A2Q9NRY5 505 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 IMPAD1Q9NX62 359 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 UTP6Q9NYH9 597 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 RDH8Q9NYR8 311 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CNOT2Q9NZN8 540 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 ACTR3BQ9P1U1 418 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 ARMCX1Q9P291 453 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 GALPQ9UBC7 116 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 DHCR7Q9UBM7 475 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 PRODH2Q9UF12 536 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PURGQ9UJV8 347 aaKnown RBP3.32□□□□□ -1.88
HTT-210ENST00000512909 FBXO5Q9UKT4 447 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PYCARDQ9ULZ3 195 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 SNX12Q9UMY4 172 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PLEKHA6Q9Y2H5 1048 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 CLCA3PQ9Y6N3 262 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 PI4KAP42356 2102 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 GVINP1Q7Z2Y8 2422 aa3.32□□□□□ -1.88
HTT-210ENST00000512909 MUC3AQ02505 3323 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 ZNF292O60281 2723 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 DOCK9Q9BZ29 2069 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 COL5A1P20908 1838 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 MN1Q10571 1320 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 IGLV3-16A0A075B6K0 115 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms