RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 LRFN4Q6PJG9 635 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 RINLQ6ZS11 566 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SLC35D2Q76EJ3 337 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 HIST3H2AQ7L7L0 130 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 HDDC2Q7Z4H3 204 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SLC30A7Q8NEW0 376 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SEMA6DQ8NFY4 1073 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SYNPRQ8TBG9 265 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 ADAMTS16Q8TE57 1224 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SNX33Q8WV41 574 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 HIST1H2ACQ93077 130 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 LRRC58Q96CX6 371 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 RAB39BQ96DA2 213 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 LRRC37BQ96QE4 947 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF426Q9BUY5 554 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 RBM4Q9BWF3 364 aaKnown RBP10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SAR1AQ9NR31 198 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 NANSQ9NR45 359 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 STX18Q9P2W9 335 aaKnown RBP10.76□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF229Q9UJW7 825 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 PCDHB10Q9UN67 800 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 FAM157AC9JC47 383 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 SEC14L2O76054 403 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 BCL10O95999 233 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 PNPP00491 289 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 IGF2P01344 180 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 TROVE2P10155 538 aaKnown RBP eCLIP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 TCN1P20061 433 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 LIPAP38571 399 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 UCP2P55851 309 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 BIDP55957 195 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 KLF3P57682 345 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 HILS1P60008 231 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 SF3A3Q12874 501 aaKnown RBP eCLIP10.75□□□□□ -0.693e-12■■■■■ 44.5
VEGFA-216ENST00000512683 ZNF74Q16587 644 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 HIST3H3Q16695 136 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 NKPD1Q17RQ9 610 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 COQ5Q5HYK3 327 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 INTS11Q5TA45 600 aaKnown RBP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 FAHD2BQ6P2I3 314 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 TTC33Q6PID6 262 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF584Q8IVC4 421 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 CPEB3Q8NE35 698 aaKnown RBP10.75□□□□□ -0.69
VEGFA-216ENST00000512683 OR8J3Q8NGG0 315 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 YIPF5Q969M3 257 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 FAHD2AQ96GK7 314 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF583Q96ND8 569 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 PRSS27Q9BQR3 290 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 TMEM38BQ9NVV0 291 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 TAS2R5Q9NYW4 299 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 TREM2Q9NZC2 230 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 TAAR3PQ9P1P4 343 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 SLC7A7Q9UM01 511 aa10.75□□□□□ -0.69
VEGFA-216ENST00000512683 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 A0A0X1KG70 313 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 IQCMA0A1B0GVH7 501 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 TRAPPC13A5PLN9 417 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 HTR3EA5X5Y0 456 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 NPPAP01160 153 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 IGHV3-13P01766 116 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 IGHG1P01857 330 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF84P51523 738 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 GUCY1A3Q02108 690 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 SLC3A1Q07837 685 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 TBC1D28Q2M2D7 210 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 SLC16A14Q7RTX9 510 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 LRP11Q86VZ4 500 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 TREML1Q86YW5 311 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 LRRC17Q8N6Y2 441 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 SLC26A7Q8TE54 656 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 RASSF5Q8WWW0 418 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 RAB1CQ92928 201 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 GCDHQ92947 438 aaPredicted RBP10.74□□□□□ -0.69
VEGFA-216ENST00000512683 TIMD4Q96H15 378 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 SUCNR1Q9BXA5 334 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 KCNN2Q9H2S1 579 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF665Q9H7R5 613 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 RNF121Q9H920 327 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 SIAEQ9HAT2 523 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 CDH20Q9HBT6 801 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 G6PC2Q9NQR9 355 aa10.74□□□□□ -0.69
VEGFA-216ENST00000512683 PPIAL4EA0A075B759 164 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 PPIAL4CA0A0B4J2A2 164 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 IGHV1-69-2A0A0G2JMI3 117 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 LOC100653049A0A140TA62 436 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 C11orf98E9PRG8 122 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 PPIAL4DF5H284 164 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 MRASO14807 208 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 RNF13O43567 381 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 SPRY1O43609 319 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 KRT34O76011 436 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 CH25HO95992 272 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 QDPRP09417 244 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 ASAH2BP0C7U1 165 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 PPIAL4FP0DN26 164 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 NAT2P11245 290 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms