RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MEIS3P2A8K0S8 358 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 HSPB2A8KAH6 182 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TNFSF11O14788 317 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 FKBP2P26885 142 aaKnown RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 TM4SF4P48230 202 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TPPP2P59282 170 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 RPL30P62888 115 aaKnown RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 HSPB2Q16082 182 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ZNF551Q7Z340 670 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 ZNF573Q86YE8 665 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CYB561A3Q8NBI2 242 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 FAM156AQ8NDB6 213 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 C1orf162Q8NEQ5 155 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 SEMA6DQ8NFY4 1073 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 ACY3Q96HD9 319 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 DHRS4Q9BTZ2 278 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CHRDL1Q9BU40 450 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ELOVL1Q9BW60 279 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 IL26Q9NPH9 171 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TAAR3PQ9P1P4 343 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TRAV36DV7A0A075B6V5 113 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 SPAARA0A1B0GVQ0 90 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 HIST1H1TP22492 207 aaPredicted RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 CSNK1G2P78368 415 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 IQCJQ1A5X6 159 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 SLC5A9Q2M3M2 681 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 FCRLAQ7L513 359 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 LSRQ86X29 649 aaPredicted RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 MFSD9Q8NBP5 474 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 DDB2Q92466 427 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 HSD17B10Q99714 261 aaKnown RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 C6orf106Q9H6K1 298 aaPredicted RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 HEXA-AS1Q9H8Q6 139 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 POPDC3Q9HBV1 291 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 MRPS28Q9Y2Q9 187 aaKnown RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 CHD1O14646 1710 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 OR7C2O60412 319 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 SLITRK5O94991 958 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 IL5P05113 134 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 F13BP05160 661 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 RPS17P08708 135 aaKnown RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 PSMB10P40306 273 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 PEA15Q15121 130 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 TUBA3EQ6PEY2 450 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 C17orf99Q6UX52 265 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 TMEM64Q6YI46 380 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 LILRA2Q8N149 483 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 PXT1Q8NFP0 134 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 C10orf82Q8WW14 230 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 RAX2Q96IS3 184 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 GPR78Q96P69 363 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 TAAR6Q96RI8 345 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 PCGF1Q9BSM1 259 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 PITHD1Q9GZP4 211 aaPredicted RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 ADAM29Q9UKF5 820 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 PRDM4Q9UKN5 801 aa8.21□□□□□ -1.09
VCAN-208ENST00000512590 CLTCQ00610 1675 aaKnown RBP8.21□□□□□ -1.09
VCAN-208ENST00000512590 INMT-MINDY4F8WBC2 141 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 PHF1O43189 567 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 MTNR1AP48039 350 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 TFPI2P48307 235 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 PSMB3P49720 205 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 MEOX2P50222 304 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 LOXL3P58215 753 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 SH3BP2P78314 561 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 TRMT10BQ6PF06 316 aaKnown RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 NRARPQ7Z6K4 114 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 CENPVQ7Z7K6 275 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 ZFAND4Q86XD8 727 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 PGBD5Q8N414 524 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 KRTCAP2Q8N6L1 136 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 OR13C5Q8NGS8 318 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 OR13C2Q8NGS9 318 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 OR56B4Q8NH76 319 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 OR1L1Q8NH94 360 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 BCL2L2Q92843 193 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 POM121L2Q96KW2 1035 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 STACQ99469 402 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 TXLNGYQ9BZA5 131 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 SLC25A18Q9H1K4 315 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 PDLIM7Q9NR12 457 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 AJAP1Q9UKB5 411 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 LTBP3Q9NS15 1303 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 CDRT15L2A8MXV6 281 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 ZNF593O00488 134 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 TAS2R19P59542 299 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 SNTB2Q13425 540 aaKnown RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 KCNAB1Q14722 419 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 ACTBL2Q562R1 376 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 MARCH3Q86UD3 253 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 CBARPQ8N350 705 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 BEST4Q8NFU0 473 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 TMED6Q8WW62 240 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 MMP27Q9H306 513 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 ERRFI1Q9UJM3 462 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 FZR1Q9UM11 496 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 ZNF487B1APH4 448 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 C1orf105O95561 183 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms