RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 GMNNO75496 209 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 UBL3O95164 117 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 SEMG1P04279 462 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 OR8G3PP0DMU2 310 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 CCL2P13500 99 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 ZNF84P51523 738 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 RPL27P61353 136 aaKnown RBP14.25□□□□□ -0.13
DDX41-213ENST00000512027 SNRPD2P62316 118 aaKnown RBP14.25□□□□□ -0.13
DDX41-213ENST00000512027 ERVK-25P63136 954 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 KRTAP1-1Q07627 177 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 FXNQ16595 210 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 IQCCQ4KMZ1 466 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 SAMD4BQ5PRF9 694 aaKnown RBP14.25□□□□□ -0.13
DDX41-213ENST00000512027 RNF113BQ8IZP6 322 aaKnown RBP14.25□□□□□ -0.13
DDX41-213ENST00000512027 SVOPLQ8N434 492 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 KCNK17Q96T54 332 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 VRK1Q99986 396 aaPredicted RBP14.25□□□□□ -0.13
DDX41-213ENST00000512027 GORASP2Q9H8Y8 452 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 MAGEL2Q9UJ55 1249 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 ADAM18Q9Y3Q7 739 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 UGT2A1Q9Y4X1 527 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 PMF1-BGLAPU3KQ54 211 aa14.25□□□□□ -0.13
DDX41-213ENST00000512027 ANK3Q12955 4377 aaKnown RBP14.25□□□□□ -0.13
DDX41-213ENST00000512027 IGHMP01871 453 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 ZNF35P13682 527 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 NPR2P20594 1047 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 SLC9A3P48764 834 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 C10orf128Q5T292 105 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 C16orf89Q6UX73 402 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 TMPRSS11FQ6ZWK6 438 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 SLC16A14Q7RTX9 510 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 HDDC2Q7Z4H3 204 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 CDK20Q8IZL9 346 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 ZCCHC24Q8N2G6 241 aaKnown RBP14.24□□□□□ -0.13
DDX41-213ENST00000512027 PAQR4Q8N4S7 273 aaPredicted RBP14.24□□□□□ -0.13
DDX41-213ENST00000512027 ZNF519Q8TB69 540 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 NABP1Q96AH0 204 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 POM121Q96HA1 1249 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 PYURFQ96I23 114 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 NSMCE2Q96MF7 247 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 ZNF442Q9H7R0 627 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 RNF121Q9H920 327 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 IL20RAQ9UHF4 553 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 FZR1Q9UM11 496 aa14.24□□□□□ -0.13
DDX41-213ENST00000512027 FAM32AQ9Y421 112 aaKnown RBP14.24□□□□□ -0.13
DDX41-213ENST00000512027 A0A1W2PRQ8 180 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 TMEM129A0AVI4 362 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 SH3PXD2BA1X283 911 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 NPIPB13A6NJU9 1138 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 CENPBD1B2RD01 187 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 B9A039 149 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 NPIPB4C9JG80 1138 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 FARS2O95363 451 aaKnown RBP14.23□□□□□ -0.13
DDX41-213ENST00000512027 FAM107AO95990 144 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 RHCEP18577 417 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 ATP6V1B2P21281 511 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 NR4A1P22736 598 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 ZNF133P52736 654 aaPredicted RBP14.23□□□□□ -0.13
DDX41-213ENST00000512027 EFNA4P52798 201 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 DGCR6Q14129 220 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 SLC25A47Q6Q0C1 308 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 CLEC2AQ6UVW9 174 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 CYP2R1Q6VVX0 501 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 RRM2BQ7LG56 351 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 GPA33Q99795 319 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 OR51B6Q9H340 312 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 PLK3Q9H4B4 646 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 ANKRD19PQ9H560 264 aa14.23□□□□□ -0.13
DDX41-213ENST00000512027 HTR3EA5X5Y0 456 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 FAM171A2A8MVW0 826 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 B2RBV5 119 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 IMPA2O14732 288 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 PDE5AO76074 875 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 SERPINA5P05154 406 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 IGFBP1P08833 259 aaPredicted RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 MMP7P09237 267 aaPredicted RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 BMP4P12644 408 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 PCSK6P29122 969 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 RPL4P36578 427 aaKnown RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 OMPP47874 163 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 LIMS1P48059 325 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 FXYD6P3P58550 94 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 SPIBQ01892 262 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 KRT72Q14CN4 511 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 EFNB3Q15768 340 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 SGCAQ16586 387 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 ZBED5Q49AG3 693 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 MESTQ5EB52 335 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 GKAP1Q5VSY0 366 aaPredicted RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 THSD4Q6ZMP0 1018 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 RINLQ6ZS11 566 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 LRP11Q86VZ4 500 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 CCDC197Q8NCU1 140 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 IL17RDQ8NFM7 739 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 OR10H5Q8NGA6 315 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 RASD2Q96D21 266 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 RSRC1Q96IZ7 334 aaKnown RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 DHRS1Q96LJ7 313 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 Q96M85 177 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 FOXN4Q96NZ1 517 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms