RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 MPGP29372 298 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 RPS6KA3P51812 740 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 RAP1BP61224 184 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 RAP1AP62834 184 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 CD47Q08722 323 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 KEAP1Q14145 624 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 TAB1Q15750 504 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 HIST3H3Q16695 136 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 CEACAM16Q2WEN9 425 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 GPR139Q6DWJ6 353 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 LRFN4Q6PJG9 635 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 BHLHA15Q7RTS1 189 aaPredicted RBP13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 IQCF1Q8N6M8 205 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 TEX47Q8TBZ9 253 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 DNAJC9Q8WXX5 260 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 NMD3Q96D46 503 aaKnown RBP13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 PLPPR2Q96GM1 343 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 UBTD1Q9HAC8 227 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 B3GAT2Q9NPZ5 323 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 KRT84Q9NSB2 600 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 STX18Q9P2W9 335 aaKnown RBP13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 TMEFF2Q9UIK5 374 aaPredicted RBP13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 POFUT2Q9Y2G5 429 aa13.62□□□□□ -0.23
SH3TC1-220ENST00000511002 IGKV1D-43A0A0B4J1Z2 117 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 CENPBD1B2RD01 187 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 RPL36A-HNRNPH2H7BZ11 118 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 XKRYO14609 159 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 EI24O14681 340 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 ARPC3O15145 178 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 RRP9O43818 475 aaKnown RBP13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 SEC14L2O76054 403 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 SLC2A10O95528 541 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 QDPRP09417 244 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 IGFBP5P24593 272 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 POU1F1P28069 291 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 ARF1P84077 181 aaKnown RBP13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 PPP2R2BQ00005 443 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 DEFB113Q30KQ7 82 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 BEX5Q5H9J7 111 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 SLC35F1Q5T1Q4 408 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 KDM4DQ6B0I6 523 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 ABHD12BQ7Z5M8 362 aaPredicted RBP13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 STEAP2Q8NFT2 490 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 MCHR2Q969V1 340 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 MBD6Q96DN6 1003 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 ALG12Q9BV10 488 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 OSBPL10Q9BXB5 764 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 OR10A4Q9H209 315 aa13.61□□□□□ -0.23
SH3TC1-220ENST00000511002 ZNF469Q96JG9 3925 aaPredicted RBP13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 CIB4A0PJX0 185 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 SLC22A23A1A5C7 686 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 PRSS37A4D1T9 235 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 HIST1H1CP16403 213 aaKnown RBP13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 CDKN2AP42771 156 aaKnown RBP13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 DBPQ10586 325 aaPredicted RBP13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 DAG1Q14118 895 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 GABRA6Q16445 453 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 PGGHGQ32M88 737 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 ADCK1Q86TW2 530 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 KRTAP1-3Q8IUG1 177 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 PARP8Q8N3A8 854 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 LNX2Q8N448 690 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 CBR4Q8N4T8 237 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 SDR9C7Q8NEX9 313 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 OR2T33Q8NG76 320 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 OR1K1Q8NGR3 316 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 OR4K13Q8NH42 304 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 RBM4BQ9BQ04 359 aaKnown RBP13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 RBM4Q9BWF3 364 aaKnown RBP13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 NELFAQ9H3P2 528 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 ARID1AO14497 2285 aa13.6□□□□□ -0.23
SH3TC1-220ENST00000511002 ZNF99A8MXY4 864 aaPredicted RBP13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 DHHO43323 396 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 IDH3BO43837 385 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 ALPLP05186 524 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 B4GALT1P15291 398 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 NOS3P29474 1203 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 ZNF133P52736 654 aaPredicted RBP13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 GINS1Q14691 196 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 STK11Q15831 433 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 HIKESHIQ53FT3 197 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 TMEM236Q5W0B7 351 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 LEG1Q6P5S2 330 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 ZNF704Q6ZNC4 412 aaPredicted RBP13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 JAZF1Q86VZ6 243 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 C1orf162Q8NEQ5 155 aaPredicted RBP13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 NSMAFQ92636 917 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 HTRA1Q92743 480 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 NEUROG1Q92886 237 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 TMEM204Q9BSN7 226 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 HDHD5Q9BXW7 423 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 SYT4Q9H2B2 425 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 FN3KQ9H479 309 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 USE1Q9NZ43 259 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 NPAP1Q9NZP6 1156 aa13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 VSX1Q9NZR4 365 aaPredicted RBP13.59□□□□□ -0.23
SH3TC1-220ENST00000511002 NKX1-2Q9UD57 310 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms