RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 SLC36A2Q495M3 483 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 MESTQ5EB52 335 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 C6orf183Q5T699 404 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 ARHGAP40Q5TG30 622 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 PRAMEF17Q5VTA0 474 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 LIPNQ5VXI9 398 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 GPR139Q6DWJ6 353 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 UNQ9370/PRO34162Q6UXP9 181 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 LINGO2Q7L985 606 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 PLXDC1Q8IUK5 500 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 IZUMO1Q8IYV9 350 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 TDHQ8IZJ6 230 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 CADM4Q8NFZ8 388 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 OR5AK2Q8NH90 309 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 GRPEL2Q8TAA5 225 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 ZFAND1Q8TCF1 268 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 HAVCR2Q8TDQ0 301 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 ZNF721Q8TF20 911 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 ADIPOR1Q96A54 375 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 DACT3Q96B18 629 aaPredicted RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 CMTM3Q96MX0 182 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 TSPAN32Q96QS1 320 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 C7orf50Q9BRJ6 194 aaKnown RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 NUDT9Q9BW91 350 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 PHF7Q9BWX1 381 aaPredicted RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 CACNG6Q9BXT2 260 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 FKRPQ9H9S5 495 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 C12orf10Q9HB07 376 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 UCKL1Q9NWZ5 548 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 STMN3Q9NZ72 180 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 RABL2AQ9UBK7 228 aaPredicted RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 RABL2BQ9UNT1 228 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 V9GY05 133 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 EML5Q05BV3 1969 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 MEGF11A6BM72 1044 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 ANKRD61A6NGH8 418 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 CENPBD1B2RD01 187 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 PIN1P1O15428 100 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 MBTPS2O43462 519 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 CDC40O60508 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
CAST-228ENST00000509903 TCRBP04435 133 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 SYPP08247 313 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 GP1BBP13224 206 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 STOMP27105 288 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 LCN1P31025 176 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 SMAD4Q13485 552 aaKnown RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 ALKBH1Q13686 389 aaKnown RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 Q499Y3 187 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 VWA2Q5GFL6 755 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 ZNF684Q5T5D7 378 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 FAM205BPQ63HN1 556 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 SLC22A10Q63ZE4 541 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 MTFR2Q6P444 385 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 OGFOD3Q6PK18 319 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 SLC29A4Q7RTT9 530 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 MARCH3Q86UD3 253 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 PLCZ1Q86YW0 608 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 TIGD4Q8IY51 512 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 CMTM4Q8IZR5 234 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 EXD3Q8N9H8 876 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 C7orf57Q8NEG2 295 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 OR1N1Q8NGS0 311 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 OR1L3Q8NH93 324 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 RPS4Y2Q8TD47 263 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 SMIM4Q8WVI0 70 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 NANOS1Q8WY41 292 aaKnown RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 HSD17B8Q92506 261 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 TAAR8Q969N4 342 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 DNAJA3Q96EY1 480 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 KLHL15Q96M94 604 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 GTPBP2Q9BX10 602 aaKnown RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 GON7Q9BXV9 100 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 PCED1AQ9H1Q7 454 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 SYT4Q9H2B2 425 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 ZNF304Q9HCX3 659 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 AKAP7Q9P0M2 348 aaPredicted RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 MRM2Q9UI43 246 aaKnown RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 MRPS17Q9Y2R5 130 aaKnown RBP6.78□□□□□ -1.32
CAST-228ENST00000509903 KLHDC2Q9Y2U9 406 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 TMEM14AQ9Y6G1 99 aa6.78□□□□□ -1.32
CAST-228ENST00000509903 PRUNE2Q8WUY3 3088 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 TP53BP1Q12888 1972 aaPredicted RBP6.77□□□□□ -1.33
CAST-228ENST00000509903 TRAV36DV7A0A075B6V5 113 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 IGHV1OR21-1A0A087WYE8 117 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 TRABD2BA6NFA1 517 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 C11orf98E9PRG8 122 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 SMLR1H3BR10 107 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 DCTN6O00399 190 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 CTDSPLO15194 276 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 GSTZ1O43708 216 aaPredicted RBP6.77□□□□□ -1.33
CAST-228ENST00000509903 SCO2O43819 266 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 PIAS2O75928 621 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 MT-ND4P03905 459 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 PGCP20142 388 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 GDNFP39905 211 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 MAGEB1P43366 347 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 SOX2P48431 317 aa6.77□□□□□ -1.33
CAST-228ENST00000509903 CSNK1EP49674 416 aaKnown RBP6.77□□□□□ -1.33
CAST-228ENST00000509903 SUMO3P55854 103 aaPredicted RBP6.77□□□□□ -1.33
CAST-228ENST00000509903 CLDN12P56749 244 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms