RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 C1QL2Q7Z5L3 287 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 VANGL1Q8TAA9 524 aaPredicted RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF519Q8TB69 540 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ADAMTS16Q8TE57 1224 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF418Q8TF45 676 aaPredicted RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 TAF15Q92804 592 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 GCDHQ92947 438 aaPredicted RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 DVL3Q92997 716 aaPredicted RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF566Q969W8 418 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF416Q9BWM5 594 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 SLC7A7Q9UM01 511 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 TRIM33Q9UPN9 1127 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 IGHV1-69-2A0A0G2JMI3 117 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 PRORSD1PA6NEY8 169 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 ZSCAN5BA6NJL1 495 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 RNF13O43567 381 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 FMO6PO60774 539 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 TRMUO75648 421 aaKnown RBP13.5□□□□□ -0.25
RAB40C-202ENST00000509637 SNAP29O95721 258 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 IGHV1-46P01743 117 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 IGHV3-13P01766 116 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 F13BP05160 661 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 LCKP06239 509 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 MMP15P51511 669 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF133P52736 654 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-202ENST00000509637 UGT2B15P54855 530 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-202ENST00000509637 MTPNP58546 118 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 NCALDP61601 193 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 AWAT1Q58HT5 328 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 SPATA46Q5T0L3 261 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 NKAIN4Q8IVV8 208 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 LRRC18Q8N456 261 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 SYT14Q8NB59 555 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 MOSPD2Q8NHP6 518 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 C1orf147Q96MC9 270 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-202ENST00000509637 C7orf26Q96N11 449 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 RNF121Q9H920 327 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 CDH20Q9HBT6 801 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 SELENONQ9NZV5 590 aa13.5□□□□□ -0.25
RAB40C-202ENST00000509637 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF346Q9UL40 294 aaKnown RBP13.5□□□□□ -0.25
RAB40C-202ENST00000509637 UBOX5O94941 541 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 SLC2A10O95528 541 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 FUT1P19526 365 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 TNFRSF1BP20333 461 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 FMODQ06828 376 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 RPL18Q07020 188 aaKnown RBP13.49□□□□□ -0.25
RAB40C-202ENST00000509637 PABPC1L2AQ5JQF8 200 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 THEM4Q5T1C6 240 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 REP15Q6BDI9 236 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 SHQ1Q6PI26 577 aaKnown RBP13.49□□□□□ -0.25
RAB40C-202ENST00000509637 RANBP3LQ86VV4 465 aaPredicted RBP13.49□□□□□ -0.25
RAB40C-202ENST00000509637 C3orf56Q8N813 242 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 PFN4Q8NHR9 129 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 ASB10Q8WXI3 467 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 HDAC2Q92769 488 aaKnown RBP13.49□□□□□ -0.25
RAB40C-202ENST00000509637 MARS2Q96GW9 593 aaKnown RBP13.49□□□□□ -0.25
RAB40C-202ENST00000509637 POM121L2Q96KW2 1035 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 CCDC28BQ9BUN5 200 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 NANSQ9NR45 359 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 MMP26Q9NRE1 261 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 C20orf141Q9NUB4 165 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 KLHL21Q9UJP4 597 aa13.49□□□□□ -0.25
RAB40C-202ENST00000509637 SOX21Q9Y651 276 aaPredicted RBP13.49□□□□□ -0.25
RAB40C-202ENST00000509637 MEGF8Q7Z7M0 2845 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 SERPINB7O75635 380 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 BCL10O95999 233 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 NGFP01138 241 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 TSPAN19P0C672 248 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF32P17041 273 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 PPIBP23284 216 aaKnown RBP13.48□□□□□ -0.25
RAB40C-202ENST00000509637 AQP2P41181 271 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 LAPTM4AQ15012 233 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 ARMC4Q5T2S8 1044 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 TMEM154Q6P9G4 183 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 TTC33Q6PID6 262 aaPredicted RBP13.48□□□□□ -0.25
RAB40C-202ENST00000509637 SLC16A14Q7RTX9 510 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 BCL6BQ8N143 479 aaPredicted RBP13.48□□□□□ -0.25
RAB40C-202ENST00000509637 CLDN22Q8N7P3 220 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 ICA1LQ8NDH6 482 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 RBM15BQ8NDT2 890 aaKnown RBP13.48□□□□□ -0.25
RAB40C-202ENST00000509637 OR1J1Q8NGS3 322 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 AKR7LQ8NHP1 331 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 IPCEF1Q8WWN9 437 aaPredicted RBP13.48□□□□□ -0.25
RAB40C-202ENST00000509637 C11orf40Q8WZ69 217 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 PCDHAC1Q9H158 963 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 NKIRAS1Q9NYS0 192 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 LEF1Q9UJU2 399 aaPredicted RBP13.48□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF229Q9UJW7 825 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 FBXL3Q9UKT7 428 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 TANC2Q9HCD6 1990 aa13.48□□□□□ -0.25
RAB40C-202ENST00000509637 TRAPPC13A5PLN9 417 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 BLOC1S5-TXNDC5H3BN57 136 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 TRIM77I1YAP6 450 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 POLR3GO15318 223 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-202ENST00000509637 SPRY3O43610 288 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms