RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GLYATQ6IB77 296 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 SVOPLQ8N434 492 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 OR1J2Q8NGS2 313 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 C10orf105Q8TEF2 133 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 LRRC37BQ96QE4 947 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 RBP7Q96R05 134 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 SEPHS2Q99611 448 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 SH3GL3Q99963 347 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 KRCC1Q9NPI7 259 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-207ENST00000509102 ZNF224Q9NZL3 707 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 EGFL7Q9UHF1 273 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 TMEM5Q9Y2B1 443 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 ARL2BPQ9Y2Y0 163 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 SNX13Q9Y5W8 968 aa16.13■□□□□ 0.17
UBE3D-207ENST00000509102 IQCMA0A1B0GVH7 501 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 A6NIZ1 184 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 DCTN3O75935 186 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 ZNF35P13682 527 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 GLRXP35754 106 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 CTXN1P60606 82 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 RAP1BP61224 184 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 RPL27P61353 136 aaKnown RBP16.12■□□□□ 0.17
UBE3D-207ENST00000509102 RAP1AP62834 184 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 RUNX1T1Q06455 604 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 LOXL1Q08397 574 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-207ENST00000509102 KRT72Q14CN4 511 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 C10orf128Q5T292 105 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 ARMC4Q5T2S8 1044 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 MBOAT2Q6ZWT7 520 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 ZNF540Q8NDQ6 660 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 SLC30A7Q8NEW0 376 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 OR51A7Q8NH64 312 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 NEU4Q8WWR8 484 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-207ENST00000509102 ALG12Q9BV10 488 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 CDH20Q9HBT6 801 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 CCNB1IP1Q9NPC3 277 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 NDE1Q9NXR1 346 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 ENPP4Q9Y6X5 453 aa16.12■□□□□ 0.17
UBE3D-207ENST00000509102 LOC390937A0A1W2PQ73 354 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 SH3PXD2BA1X283 911 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 CD5LO43866 347 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 PATE4P0C8F1 98 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 ITGA2P17301 1181 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 MAKP20794 623 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 RPL4P36578 427 aaKnown RBP16.11■□□□□ 0.17
UBE3D-207ENST00000509102 EVX1P49640 407 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 SELENOVP59797 346 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 HSF2Q03933 536 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 TBC1D28Q2M2D7 210 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 THEM4Q5T1C6 240 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 ANKS4BQ8N8V4 417 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 RBM15BQ8NDT2 890 aaKnown RBP16.11■□□□□ 0.17
UBE3D-207ENST00000509102 MRPL24Q96A35 216 aaKnown RBP16.11■□□□□ 0.17
UBE3D-207ENST00000509102 ZNF75AQ96N20 296 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 TNFRSF13CQ96RJ3 184 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 NMNAT1Q9HAN9 279 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-207ENST00000509102 SIAEQ9HAT2 523 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 MAN2C1Q9NTJ4 1040 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 MAGEL2Q9UJ55 1249 aa16.11■□□□□ 0.17
UBE3D-207ENST00000509102 TRAV27A0A087WT01 109 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 A0A087WUU8 490 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 FFAR1O14842 300 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 LY6HO94772 140 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 SLC2A10O95528 541 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 IGHMP01871 453 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 H1F0P07305 194 aaKnown RBP16.1■□□□□ 0.17
UBE3D-207ENST00000509102 RHCEP18577 417 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 USF1P22415 310 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-207ENST00000509102 MNAT1P51948 309 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 ZNF133P52736 654 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-207ENST00000509102 MRPS34P82930 218 aaKnown RBP16.1■□□□□ 0.17
UBE3D-207ENST00000509102 MXRA7P84157 204 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 FGD3Q5JSP0 725 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 SAMD4BQ5PRF9 694 aaKnown RBP16.1■□□□□ 0.17
UBE3D-207ENST00000509102 LRRC18Q8N456 261 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 RNF148Q8N7C7 305 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 NSMAFQ92636 917 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 KCNK17Q96T54 332 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 DOK1Q99704 481 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 MS4A5Q9H3V2 200 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 YAE1D1Q9NRH1 226 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 DCAF13Q9NV06 445 aaKnown RBP16.1■□□□□ 0.17
UBE3D-207ENST00000509102 GRHPRQ9UBQ7 328 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 TAGLN3Q9UI15 199 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 GPR160Q9UJ42 338 aa16.1■□□□□ 0.17
UBE3D-207ENST00000509102 FN1P02751 2386 aaKnown RBP16.09■□□□□ 0.17
UBE3D-207ENST00000509102 ARFGEF3Q5TH69 2177 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 A0A1W2PRQ8 180 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 M0R233 179 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 XKRYO14609 159 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 SYNGR3O43761 229 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 APLNRP35414 380 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 DGCR6Q14129 220 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 SGCAQ16586 387 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 TMEM249Q2WGJ8 235 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 C16orf89Q6UX73 402 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 UNQ6126/PRO20091Q6UXV3 157 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 TMPRSS11FQ6ZWK6 438 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 PGAM4Q8N0Y7 254 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 OR13C2Q8NGS9 318 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms