RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ZNF583Q96ND8 569 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 ECSITQ9BQ95 431 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 FGFR1OP2Q9NVK5 253 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 ARGLU1Q9NWB6 273 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 DUSP13Q9UII6 198 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 RIMS3Q9UJD0 308 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 A0A1W2PPW3 197 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 BBIP1A8MTZ0 92 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 FAM220BPB1ANY3 271 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 CENPBD1B2RD01 187 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 MCIDASD6RGH6 385 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 TRMUO75648 421 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 RP2O75695 350 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 SLC2A10O95528 541 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 NPPAP01160 153 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 VIMP08670 466 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 NAT2P11245 290 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 ACADSP16219 412 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 FUT1P19526 365 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 COL8A2P25067 703 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 OR1E2P47887 323 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 ERVS71-1P61550 626 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 SLC36A2Q495M3 483 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 MMEL1Q495T6 779 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 LRRC23Q53EV4 343 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 C10orf128Q5T292 105 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 ARMC4Q5T2S8 1044 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 RGS7BPQ6MZT1 257 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 TMEM53Q6P2H8 277 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 SLC16A14Q7RTX9 510 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 DPPA2Q7Z7J5 298 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 MOSPD2Q8NHP6 518 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 C10orf82Q8WW14 230 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 LIPHQ8WWY8 451 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 RDH5Q92781 318 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 NMD3Q96D46 503 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 SGTBQ96EQ0 304 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 RACGAP1Q9H0H5 632 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 C1orf198Q9H425 327 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 SAR1AQ9NR31 198 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 INIPQ9NRY2 104 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 MRGBPQ9NV56 204 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 UGT2A1Q9Y4X1 527 aa11.14□□□□□ -0.63
HMGCS1-205ENST00000508319 IGLV3-9A0A075B6K5 115 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 NPIPB13A6NJU9 1138 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 NPIPB4C9JG80 1138 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 WNT9BO14905 357 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 PIP5K1CO60331 668 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 CLPTM1O96005 669 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 IFNA14P01570 189 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 THRBP10828 461 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF250P15622 560 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 FUT4P22083 530 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 ACHEP22303 614 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 GPR6P46095 362 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 DAP3P51398 398 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF84P51523 738 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 ARFIP2P53365 341 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 MRPS11P82912 194 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 FMODQ06828 376 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 MAPRE2Q15555 327 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 TBC1D28Q2M2D7 210 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 ALKBH6Q3KRA9 238 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 CYBRD1Q53TN4 286 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 HDDC2Q7Z4H3 204 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 LRRC18Q8N456 261 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 RBM15BQ8NDT2 890 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 HDAC2Q92769 488 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 YIPF5Q969M3 257 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 NABP1Q96AH0 204 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 TSPAN32Q96QS1 320 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 OR51B6Q9H340 312 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 RNF121Q9H920 327 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 CDH20Q9HBT6 801 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF275Q9NSD4 429 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 TAAR3PQ9P1P4 343 aa11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF346Q9UL40 294 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-205ENST00000508319 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 PTHP01270 115 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 SAGP10523 405 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 CDAP32320 146 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 MAGEB1P43366 347 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 DVL1P1P54792 670 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 KLF3P57682 345 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 MRPS34P82930 218 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 SF3A3Q12874 501 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 NKPD1Q17RQ9 610 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 OR2T12Q8NG77 320 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 CLDND2Q8NHS1 167 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 PRRC1Q96M27 445 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 BCL2L14Q9BZR8 327 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 TXNIPQ9H3M7 391 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 SMURF2Q9HAU4 748 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 STX18Q9P2W9 335 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms