RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 NKX1-2Q9UD57 310 aaPredicted RBP17.67■□□□□ 0.42
USP53-203ENST00000507597 MYO18BQ8IUG5 2567 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 TUBAL3A6NHL2 446 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 PRR23D1E9PI22 279 aaPredicted RBP17.66■□□□□ 0.42
USP53-203ENST00000507597 CASKO14936 926 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 SLC16A7O60669 478 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 PRR23D2P0DMB1 279 aaPredicted RBP17.66■□□□□ 0.42
USP53-203ENST00000507597 EDNRAP25101 427 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 TFF3Q07654 80 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 TIMM23BQ5SRD1 257 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 SLX4IPQ5VYV7 408 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 TTC23Q5W5X9 447 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 ACSM5Q6NUN0 579 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 SLC25A47Q6Q0C1 308 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 DEPDC4Q8N2C3 294 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 IQCF1Q8N6M8 205 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 OR1K1Q8NGR3 316 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 TRUB1Q8WWH5 349 aaKnown RBP17.66■□□□□ 0.42
USP53-203ENST00000507597 WACQ9BTA9 647 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 SYT4Q9H2B2 425 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 IMPAD1Q9NX62 359 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 AMDHD2Q9Y303 409 aa17.66■□□□□ 0.42
USP53-203ENST00000507597 UBR5O95071 2799 aaPredicted RBP17.66■□□□□ 0.42
USP53-203ENST00000507597 H0YJX3 145 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 SURF4O15260 269 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 RAD51DO75771 328 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 ITGA5P08648 1049 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 OR8G3PP0DMU2 310 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 SLC25A1P53007 311 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 ARF1P84077 181 aaKnown RBP17.65■□□□□ 0.42
USP53-203ENST00000507597 GLO1Q04760 184 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 GABRA6Q16445 453 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 ZIK1Q3SY52 487 aaPredicted RBP17.65■□□□□ 0.42
USP53-203ENST00000507597 C9orf135Q5VTT2 229 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 ZNF813Q6ZN06 617 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 PTCHD4Q6ZW05 846 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 ZNF627Q7L945 461 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 SLC37A3Q8NCC5 494 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 NPEPL1Q8NDH3 523 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 NSMAFQ92636 917 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 HRASLS5Q96KN8 279 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 MED18Q9BUE0 208 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 GRIP2Q9C0E4 1043 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 ACTR6Q9GZN1 396 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 RACGAP1Q9H0H5 632 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 TOR3AQ9H497 397 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 RERGLQ9H628 205 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 SRA1Q9HD15 236 aaKnown RBP17.65■□□□□ 0.42
USP53-203ENST00000507597 ZNF226Q9NYT6 803 aa17.65■□□□□ 0.42
USP53-203ENST00000507597 OR5H1A6NKK0 313 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 H7C1C5 153 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 MPZL2O60487 215 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 LCN6P62502 163 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 MRPS34P82930 218 aaKnown RBP17.64■□□□□ 0.41
USP53-203ENST00000507597 CDSNQ15517 529 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 PHYHD1Q5SRE7 291 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 TMEM236Q5W0B7 351 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 GLB1L2Q8IW92 636 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 DHRSXQ8N5I4 330 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 OTULINQ96BN8 352 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 NMD3Q96D46 503 aaKnown RBP17.64■□□□□ 0.41
USP53-203ENST00000507597 NUAK2Q9H093 628 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 NELFAQ9H3P2 528 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 SEC61A2Q9H9S3 476 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 SIAEQ9HAT2 523 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 RPRD1BQ9NQG5 326 aaKnown RBP17.64■□□□□ 0.41
USP53-203ENST00000507597 TMEM38BQ9NVV0 291 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 B9D1Q9UPM9 204 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 MOKQ9UQ07 419 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 GMPPBQ9Y5P6 360 aa17.64■□□□□ 0.41
USP53-203ENST00000507597 PCNX1Q96RV3 2341 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 LOC100130705A0A1B0GUX0 176 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 SLC2A10O95528 541 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 SNAP29O95721 258 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 LAP3P28838 519 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 KIR2DL3P43628 341 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 CRMP1Q14194 572 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 C12orf73Q69YU5 71 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 LINGO2Q7L985 606 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 ZBTB46Q86UZ6 589 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 SLC22A24Q8N4F4 322 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 PROKR2Q8NFJ6 384 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 OR8J1Q8NGP2 316 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 DACH2Q96NX9 599 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 APOL4Q9BPW4 351 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 SLC17A5Q9NRA2 495 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 FBXL3Q9UKT7 428 aa17.63■□□□□ 0.41
USP53-203ENST00000507597 A0A1W2PPL8 197 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 OR6C68A6NDL8 312 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 SNTNA6NMZ2 147 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 SLC16A6O15403 523 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 TMCC2O75069 709 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 UBL3O95164 117 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 GGT2P36268 569 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 CAPZA2P47755 286 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 HSPA13P48723 471 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 PCBD1P61457 104 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 FMODQ06828 376 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 KEAP1Q14145 624 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 SGCAQ16586 387 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms