RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF77Q15935 545 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 GXYLT1Q4G148 440 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 FAM166AQ6J272 317 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 CNKSR3Q6P9H4 555 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 ZCCHC12Q6PEW1 402 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 ULK3Q6PHR2 472 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 IL34Q6ZMJ4 242 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 OR8D1Q8WZ84 308 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 ATG5Q9H1Y0 275 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 MKKSQ9NPJ1 570 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 POLE3Q9NRF9 147 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 SCN2AQ99250 2005 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 TMEM212A6NML5 194 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC17A2O00624 439 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 UBE2CO00762 179 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 S100A9P06702 114 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF806P0C7X5 589 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 GABRA3P34903 492 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 CDKN2AP42771 156 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 NAAAQ02083 359 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 DMWDQ09019 674 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 RAB11BQ15907 218 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 LEG1Q6P5S2 330 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 PARGQ86W56 976 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF676Q8N7Q3 588 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 EXD3Q8N9H8 876 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 EGLN1Q9GZT9 426 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 COMMD4Q9H0A8 199 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 TMEM231Q9H6L2 316 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 RCC2Q9P258 522 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 DHCR7Q9UBM7 475 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 PLEKHA6Q9Y2H5 1048 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 SPTBP11277 2137 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 LATO43561 262 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 DNAJB6O75190 326 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 PAX6P26367 422 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 RPS4XP62701 263 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 ID2Q02363 134 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 PJVKQ0ZLH3 352 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 RUNX2Q13950 521 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 PEA15Q15121 130 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 MST1LQ2TV78 715 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 PRAMEF17Q5VTA0 474 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 KIRREL2Q6UWL6 708 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF704Q6ZNC4 412 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 LYG2Q86SG7 212 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 CDC20BQ86Y33 519 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF614Q8N883 585 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 SEMA6CQ9H3T2 930 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 SEBOXQ9HB31 216 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 VSIG4Q9Y279 399 aa15.49■□□□□ 0.07
SQSTM1-211ENST00000506690 TEX13DA0A0J9YY54 714 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 CPED1A4D0V7 1026 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 C4orf47A7E2U8 309 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 CCL16O15467 120 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 P2RX6O15547 441 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 NARSO43776 548 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 IL2RAP01589 272 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 FAM157CP0CG43 387 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 CMPK1P30085 196 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 HAAOP46952 286 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC25A1P53007 311 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 OR7A5Q15622 319 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC25A42Q86VD7 318 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 BAP18Q8IXM2 172 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 PRSS35Q8N3Z0 413 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 BPIFB2Q8N4F0 458 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 MITD1Q8WV92 249 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 TSSK2Q96PF2 358 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 GPX7Q96SL4 187 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 NRIP2Q9BQI9 281 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 SLCO5A1Q9H2Y9 848 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 TMEM74BQ9NUR3 256 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF107Q9UII5 783 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 OR52A4PA6NMU1 304 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 H3BSH0 61 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 DOK2O60496 412 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 ICOSLGO75144 302 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 PGAM2P15259 253 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 PNLIPRP3Q17RR3 467 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 HNRNPA1L2Q32P51 320 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 GFOD2Q3B7J2 385 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 ABHD13Q7L211 337 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC6A7Q99884 636 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 ULBP3Q9BZM4 244 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 NIT2Q9NQR4 276 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 TBX21Q9UL17 535 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 DAPP1Q9UN19 280 aa15.48■□□□□ 0.07
SQSTM1-211ENST00000506690 LAMA3Q16787 3333 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF736B4DX44 427 aaPredicted RBP15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF208O43345 1280 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 KCNAB3O43448 404 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 MOSPD3O75425 235 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 CYB5AP00167 134 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 PTAFRP25105 342 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 ELAVL3Q14576 367 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 NKAPLQ5M9Q1 402 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 LILRA6Q6PI73 481 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms