RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 RNF212BA8MTL3 300 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 ATP6V1G2-DDX39BF2Z307 99 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 ACOT8O14734 319 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 NDUFB2O95178 105 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 SLC2A10O95528 541 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 HLA-HP01893 362 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 CECR9P0C854 216 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 NR2C1P13056 603 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 IDH3GP51553 393 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-209ENST00000506630 ERVK-25P63136 954 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 FMODQ06828 376 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 BNIP1Q12981 228 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 HIST3H3Q16695 136 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 FAM205BPQ63HN1 556 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 LRFN4Q6PJG9 635 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 FANK1Q8TC84 345 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 SMAP2Q8WU79 429 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-209ENST00000506630 TMEM171Q8WVE6 324 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 HTRA1Q92743 480 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 POP5Q969H6 163 aaKnown RBP11.41□□□□□ -0.58
TCOF1-209ENST00000506630 KATNB1Q9BVA0 655 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 MRPL13Q9BYD1 178 aaKnown RBP11.41□□□□□ -0.58
TCOF1-209ENST00000506630 SEC61A2Q9H9S3 476 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 TMEM38BQ9NVV0 291 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 IL20RAQ9UHF4 553 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 MOKQ9UQ07 419 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 SIGLEC7Q9Y286 467 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 ADAM18Q9Y3Q7 739 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 LYVE1Q9Y5Y7 322 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 CHD3Q12873 2000 aaKnown RBP11.41□□□□□ -0.58
TCOF1-209ENST00000506630 A6NIZ1 184 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 E7EQL1 145 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 H7C1C5 153 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 TNFRSF11BO00300 401 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 KRT36O76013 467 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 FARS2O95363 451 aaKnown RBP11.4□□□□□ -0.58
TCOF1-209ENST00000506630 RAB36O95755 333 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 IGKV3-15P01624 115 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 CD14P08571 375 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 CELA3BP08861 270 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 CBR1P16152 277 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF26P17031 533 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-209ENST00000506630 ARR3P36575 388 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 IFNGR2P38484 337 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 PTH2RP49190 550 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 RASSF2P50749 326 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 RAP1BP61224 184 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 LCN6P62502 163 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 RAP1AP62834 184 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 PIGFQ07326 219 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 FLOT2Q14254 428 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 GSG1Q2KHT4 349 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 PGM2L1Q6PCE3 622 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 B3GLCTQ6Y288 498 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF627Q7L945 461 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 ZER1Q7Z7L7 766 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 SPATA24Q86W54 205 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 CCDC36Q8IYA8 594 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 SLC22A24Q8N4F4 322 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 CLDN22Q8N7P3 220 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 OR9Q2Q8NGE9 314 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF519Q8TB69 540 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 NSMAFQ92636 917 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 Q96M85 177 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF570Q96NI8 536 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 KCNK17Q96T54 332 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 GPA33Q99795 319 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 ALG12Q9BV10 488 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 CXorf56Q9H5V9 222 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 CRNNQ9UBG3 495 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-209ENST00000506630 GRHPRQ9UBQ7 328 aa11.4□□□□□ -0.58
TCOF1-209ENST00000506630 IGKV1D-43A0A0B4J1Z2 117 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 TEX13CA0A0J9YWL9 993 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 DHRS12A0PJE2 317 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 AQP12BA6NM10 295 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 XKRYO14609 159 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 ENTPD5O75356 428 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 PTP4A3O75365 173 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 ATP5HO75947 161 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 UBL3O95164 117 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 IFNA2P01563 188 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 CRYAAP02489 173 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 SOD3P08294 240 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 OR8G3PP0DMU2 310 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 RAP2AP10114 183 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 PTDSS1P48651 473 aaKnown RBP11.39□□□□□ -0.59
TCOF1-209ENST00000506630 NAAAQ02083 359 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 PPP1R8Q12972 351 aaKnown RBP11.39□□□□□ -0.59
TCOF1-209ENST00000506630 PGGHGQ32M88 737 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 C3orf36Q3SXR2 165 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 C10orf128Q5T292 105 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 PGBD2Q6P3X8 592 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 SLC16A14Q7RTX9 510 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 MYPOPQ86VE0 399 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-209ENST00000506630 AQP12AQ8IXF9 295 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 ADGRG5Q8IZF4 528 aa11.39□□□□□ -0.59
TCOF1-209ENST00000506630 ARIH2OSQ8N7S6 290 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms