RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 COL13A1Q5TAT6 717 aaPredicted RBP6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 OLFML2AQ68BL7 652 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF626Q68DY1 528 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR5M10Q6IEU7 315 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 CDH24Q86UP0 819 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 PLPP7Q8NBV4 271 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 OTOSQ8NHW6 89 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 C15orf40Q8WUR7 153 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 DVL3Q92997 716 aaPredicted RBP6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 ADIPOR1Q96A54 375 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 SFXN2Q96NB2 322 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 TBL1XR1Q9BZK7 514 aa6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 MRTO4Q9UKD2 239 aaKnown RBP6.89□□□□□ -1.31
PPARGC1A-204ENST00000506055 CACNA1CQ13936 2221 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 TRBV5-7A0A0A0MS05 114 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 RPS10-NUDT3A0A1W2PQS6 291 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 FRG2CA6NGY1 282 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 H7C417 338 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 L7N2F9 121 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMEM127O75204 238 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 CTAG2O75638 210 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF432O94892 652 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 KDM4BO94953 1096 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 IGF2P01344 180 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 GTF2F2P13984 249 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 CPN1P15169 458 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 LTBRP36941 435 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 FASLGP48023 281 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 DMWDQ09019 674 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ACKR1Q16570 336 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 VWA2Q5GFL6 755 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 CLLU1Q5K131 121 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 HLA-DQA1Q5Y7H0 255 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ANKRD16Q6P6B7 361 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 KDM8Q8N371 416 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 SPICQ8N5J4 248 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR51S1Q8NGJ8 323 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR4C16Q8NGL9 310 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR5M1Q8NGP8 315 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF721Q8TF20 911 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 MCHR2Q969V1 340 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 OMA1Q96E52 524 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 C4orf45Q96LM5 186 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR1F2PQ96R84 312 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 PELOQ9BRX2 385 aaKnown RBP6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 NUDT9Q9BW91 350 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 LAT2Q9GZY6 243 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ATG5Q9H1Y0 275 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 CUTCQ9NTM9 273 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 COQ3Q9NZJ6 369 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF224Q9NZL3 707 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 MYEF2Q9P2K5 600 aaKnown RBP6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 MTFP1Q9UDX5 166 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 A0A1W2PPL8 197 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 PLSCR5A0PG75 271 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 SHOXO15266 292 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 CDC40O60508 579 aaKnown RBP eCLIP6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 DDAH2O95865 285 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 PNPP00491 289 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 BGLAPP02818 100 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 VSIG10L2P0DP72 767 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 GALNSP34059 522 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 FAUP35544 74 aaKnown RBP6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 H2BFSP57053 126 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ADAM8P78325 824 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 SLC17A1Q14916 467 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 RBMS2Q15434 407 aaKnown RBP6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 C2orf68Q2NKX9 166 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 SFRP5Q5T4F7 317 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR7E24Q6IFN5 339 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 MDGA2Q7Z553 956 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 KRT77Q7Z794 578 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 BIVMQ86UB2 503 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 LRRC20Q8TCA0 184 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 FAM3DQ96BQ1 224 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF285Q96NJ3 590 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 GSX2Q9BZM3 304 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMEM138Q9NPI0 162 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 GPR27Q9NS67 375 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 RDH8Q9NYR8 311 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 FBXL3Q9UKT7 428 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 B9D1Q9UPM9 204 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 AUP1Q9Y679 476 aa6.88□□□□□ -1.31
PPARGC1A-204ENST00000506055 TRAV36DV7A0A075B6V5 113 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 UBE2QL1A1L167 161 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 PRSS37A4D1T9 235 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 TLCD2A6NGC4 264 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SHISA7A6NL88 538 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C2CD4DB7Z1M9 353 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C10orf142B7Z368 130 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 ARPC5O15511 151 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 MPZL1O95297 269 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 CD3DP04234 171 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 IGKV3-11P04433 115 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 GP1BBP13224 206 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 CSRP1P21291 193 aaKnown RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SLC6A8P48029 635 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms