RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 DCTP40126 519 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 NR4A2P43354 598 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 OR2B8PP59922 312 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 RPS18P62269 152 aaKnown RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 FOXI1Q12951 378 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SMCO1Q147U7 214 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 EMC2Q15006 297 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 NDUFA5Q16718 116 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 TPRG1LQ5T0D9 272 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF585AQ6P3V2 769 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 PGBD5Q8N414 524 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 PRELID2Q8N945 189 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 HSD17B11Q8NBQ5 300 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 OR10K1Q8NGX5 313 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 OR6K3Q8NGY3 331 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 NELFBQ8WX92 580 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 BORCS5Q969J3 196 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ANKRD9Q96BM1 317 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SARAFQ96BY9 339 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 NSL1Q96IY1 281 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 TXNDC15Q96J42 360 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 CLCC1Q96S66 551 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 C6orf50Q9HD87 102 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ADAMTS20P59510 1910 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 USP47Q96K76 1375 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 DISC1C4P0D8 188 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 INSM1Q01101 510 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ASAH1Q13510 395 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 C4orf26Q17RF5 130 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 Q6ZTK2 550 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ATG4DQ86TL0 474 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 DHFR2Q86XF0 187 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 MAPKAPK5-AS1Q8N8E1 139 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZSCAN4Q8NAM6 433 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 PXT1Q8NFP0 134 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 VN1R2Q8NFZ6 395 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 OR10A7Q8NGE5 316 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZBED6CLQ96FA7 236 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 TSNAXQ99598 290 aaKnown RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 GABRG3Q99928 467 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 COMMD4Q9H0A8 199 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZDHHC2Q9UIJ5 367 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 MTCL1Q9Y4B5 1905 aaKnown RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 TINCRA0A1B0GVN0 87 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF233A6NK53 670 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF98A6NK75 572 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 SLC1A7O00341 560 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 SUPT3HO75486 399 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 CA11O75493 328 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 RFPL2O75678 378 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 MBL2P11226 248 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 KCNE1P15382 129 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 PSMA1P25786 263 aaKnown RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ADORA1P30542 326 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 RPL5P46777 297 aaKnown RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 RPL31P62899 125 aaKnown RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 GTF2H2Q13888 395 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 PRPSAP1Q14558 356 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 GTF2H2CQ6P1K8 395 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 VRK3Q8IV63 474 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF383Q8NA42 475 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ST6GALNAC3Q8NDV1 305 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 OR10X1Q8NGY0 326 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 Q8TCH9 128 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 PNPLA2Q96AD5 504 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ITCHQ96J02 903 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF599Q96NL3 588 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 IL12RB2Q99665 862 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ELOVL4Q9GZR5 314 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 HRASLS2Q9NWW9 162 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 SMPXQ9UHP9 88 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 PCF11O94913 1555 aaKnown RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 A0A0A6YYD5 115 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 SMIM28A0A1B0GU29 152 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ERVV-2B6SEH9 535 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ATP6V1G2-DDX39BF2Z307 99 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 INPP4BO15327 924 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 CCNKO75909 580 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 SERPINB2P05120 415 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 CDH1P12830 882 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 GATA1P15976 413 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 HTR1FP30939 366 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 PCK1P35558 622 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 RFC3P40938 356 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 AVPR1BP47901 424 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 TCL1AP56279 114 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 TAS2R60P59551 318 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 IL5RAQ01344 420 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF91Q05481 1191 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 THOC6Q86W42 341 aaKnown RBP4.47□□□□□ -1.69
NIPBL-204ENST00000504430 OR5K2Q8NHB8 316 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF502Q8TBZ5 544 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 RAB8BQ92930 207 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM56Q96MV1 263 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 ZIM3Q96PE6 472 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 DHRS9Q9BPW9 319 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 HOXD1Q9GZZ0 328 aa4.47□□□□□ -1.69
NIPBL-204ENST00000504430 KLRF1Q9NZS2 232 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms