RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ZNF716A6NP11 495 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 AHRRA9YTQ3 701 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF814B7Z6K7 855 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 H3BSA7 217 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 DCTN6O00399 190 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC22A1O15245 554 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RAMP1O60894 148 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SULT1C4O75897 302 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 AQP8O94778 261 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 GABARAPO95166 117 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 APOL3O95236 402 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 MRPL3P09001 348 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CTLA4P16410 223 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CD36P16671 472 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CPEP16870 476 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 GALP22466 123 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 LAP3P28838 519 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 PTGS2P35354 604 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 NAA10P41227 235 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ENTPD1P49961 510 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF84P51523 738 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 GBX2P52951 348 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SRYQ05066 204 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RUNX1T1Q06455 604 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CAMK2DQ13557 499 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 TPBGQ13641 420 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 TRAM1Q15629 374 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CDONQ4KMG0 1287 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CCDC58Q4VC31 144 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RNFT1Q5M7Z0 435 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 C10orf128Q5T292 105 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RIPPLY2Q5TAB7 128 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC18B1Q6NT16 456 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF544Q6NX49 715 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 KCTD18Q6PI47 426 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC25A47Q6Q0C1 308 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 FAM180AQ6UWF9 173 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 AAED1Q7RTV5 226 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 FAM220AQ7Z4H9 259 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CDC20BQ86Y33 519 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SIAH3Q8IW03 269 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 GHDCQ8N2G8 530 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RBMXL3Q8N7X1 1067 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SYT14Q8NB59 555 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 OR10H5Q8NGA6 315 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 OR51L1Q8NGJ5 315 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 OR6N2Q8NGY6 317 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SPRYD4Q8WW59 207 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC39A7Q92504 469 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 TMEM54Q969K7 222 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RELTQ969Z4 430 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ISOC1Q96CN7 298 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 NMD3Q96D46 503 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ABHD17AQ96GS6 310 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 WDYHV1Q96HA8 205 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 OPALINQ96PE5 141 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 TSSK2Q96PF2 358 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 OR2M2Q96R28 347 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 OR5M11Q96RB7 305 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF649Q9BS31 505 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 TTYH2Q9BSA4 534 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 WACQ9BTA9 647 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 EMC6Q9BV81 110 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 FUNDC2Q9BWH2 189 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CDADC1Q9BWV3 514 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RERGLQ9H628 205 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 BCO1Q9HAY6 547 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 TAS2R16Q9NYV7 291 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 CLEC2DQ9UHP7 191 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 COA3Q9Y2R0 106 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 RAXQ9Y2V3 346 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 DMXL1Q9Y485 3027 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 METTL15A6NJ78 407 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 FAM171A2A8MVW0 826 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 H0YC42 278 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF593O00488 134 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 SELENOFO60613 162 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 MRPL33O75394 65 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF254O75437 659 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF432O94892 652 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 TFP02787 698 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 KRT8P05787 483 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 CD1AP06126 327 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ADRA2AP08913 450 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 HOXD4P09016 255 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 QDPRP09417 244 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 SFTPCP11686 197 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ALOX5APP20292 161 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 NPR2P20594 1047 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 GABRA5P31644 462 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 PTGER4P35408 488 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 LIPAP38571 399 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 LSM6P62312 80 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 CXADRP78310 365 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ADAM8P78325 824 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF85Q03923 595 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 KCNMB1Q16558 191 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 TSTQ16762 297 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 PCK2Q16822 640 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 NRN1LQ496H8 165 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms