RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 BPGMP07738 259 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 MYZAPP0CAP1 466 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 ADORA3P0DMS8 318 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 MELKQ14680 651 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 FIP1L1Q6UN15 594 aaKnown RBP9.84□□□□□ -0.83
CDK9-205ENST00000498339 BTNL3Q6UXE8 466 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 PXKQ7Z7A4 578 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 HIPK4Q8NE63 616 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 ZNF566Q969W8 418 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 PKNOX2Q96KN3 472 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 MOGAT1Q96PD6 335 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 CITED1Q99966 193 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 RBM4BQ9BQ04 359 aaKnown RBP9.84□□□□□ -0.83
CDK9-205ENST00000498339 NUF2Q9BZD4 464 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 NANOGQ9H9S0 305 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 PATZ1Q9HBE1 687 aaKnown RBP9.84□□□□□ -0.83
CDK9-205ENST00000498339 TCF7L2Q9NQB0 619 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 CYSLTR2Q9NS75 346 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 DCAF16Q9NXF7 216 aa9.84□□□□□ -0.83
CDK9-205ENST00000498339 MRPL39Q9NYK5 338 aaKnown RBP9.84□□□□□ -0.83
CDK9-205ENST00000498339 KMT2CQ8NEZ4 4911 aaKnown RBP9.83□□□□□ -0.84
CDK9-205ENST00000498339 WDR91A4D1P6 747 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 ZSCAN5BA6NJL1 495 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 LRRN3E7EW58 273 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 DHHO43323 396 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 MFN2O95140 757 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 HTR2AP28223 471 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 MPV17P39210 176 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 MMP15P51511 669 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 ZMAT1Q5H9K5 638 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 THEM4Q5T1C6 240 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 ULK3Q6PHR2 472 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 UNQ6126/PRO20091Q6UXV3 157 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 WDR88Q6ZMY6 472 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 SLC35D2Q76EJ3 337 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 DPPA2Q7Z7J5 298 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 NUDCD3Q8IVD9 361 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 LRRC18Q8N456 261 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 TMEM54Q969K7 222 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 SLC47A1Q96FL8 570 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 SLC41A3Q96GZ6 507 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 SLC30A2Q9BRI3 323 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 KCNN2Q9H2S1 579 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 MARCH7Q9H992 704 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 MSL2Q9HCI7 577 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 THUMPD1Q9NXG2 353 aaKnown RBP9.83□□□□□ -0.84
CDK9-205ENST00000498339 EIF3KQ9UBQ5 218 aaKnown RBP9.83□□□□□ -0.84
CDK9-205ENST00000498339 ZDHHC8Q9ULC8 765 aa9.83□□□□□ -0.84
CDK9-205ENST00000498339 CLPSL1A2RUU4 121 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 PLPP3O14495 311 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 TIMM8AO60220 97 aaPredicted RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 TSPAN15O95858 294 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 QDPRP09417 244 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 ALDOCP09972 364 aaKnown RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 TNFSF4P23510 183 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 IL12AP29459 219 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 RBMXP38159 391 aaKnown RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 LIPAP38571 399 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 SLC6A9P48067 706 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 ZNF84P51523 738 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 MVDP53602 400 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 CLRN1P58418 232 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 ABCE1P61221 599 aaKnown RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 BTG1P62324 171 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 TNFAIP6P98066 277 aaPredicted RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 DEFB112Q30KQ8 113 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 FBLN7Q53RD9 439 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 C6orf10Q5SRN2 563 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 BRD3OSQ6XYD6 125 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 LSMEM1Q8N8F7 131 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 OR5J2Q8NH18 312 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 OR6S1Q8NH40 331 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 OR6X1Q8NH79 312 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 BBS10Q8TAM1 723 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 FAM110DQ8TAY7 271 aaPredicted RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 SLC25A40Q8TBP6 338 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 MAL2Q969L2 176 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 SLC35B4Q969S0 331 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 SLC19A3Q9BZV2 496 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 OR2J1Q9GZK6 312 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 TPT1P8Q9HAU6 139 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 TMEM27Q9HBJ8 222 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 CCNB1IP1Q9NPC3 277 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 SLC6A13Q9NSD5 602 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 TMEM106BQ9NUM4 274 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 AIG1Q9NVV5 245 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 CGGBP1Q9UFW8 167 aaPredicted RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 SLC13A4Q9UKG4 626 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 RAP2CQ9Y3L5 183 aa9.82□□□□□ -0.84
CDK9-205ENST00000498339 TET2Q6N021 2002 aaPredicted RBP9.82□□□□□ -0.84
CDK9-205ENST00000498339 C5orf49A4QMS7 147 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 SLC22A31A6NKX4 558 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 A8MXK9 166 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 SRRM5B3KS81 715 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 RNF13O43567 381 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 NGFP01138 241 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 RPS2P15880 293 aaKnown RBP9.81□□□□□ -0.84
CDK9-205ENST00000498339 STOMP27105 288 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 CD80P33681 288 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 RPL14P50914 215 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms