RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PKMYT1Q99640 499 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NUDT16L1Q9BRJ7 211 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 FEM1AQ9BSK4 669 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PSMG3Q9BT73 122 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRI1Q9BV20 369 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPL4Q9BYD3 311 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 KATNBL1Q9H079 304 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 HEXA-AS1Q9H8Q6 139 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CD248Q9HCU0 757 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DAZ1Q9NQZ3 744 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 FARSBQ9NSD9 589 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 BLOC1S4Q9NUP1 217 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WARS2Q9UGM6 360 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 FBXW2Q9UKT8 454 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 HCN2Q9UL51 889 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CSNK1G3Q9Y6M4 447 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PCDH11YQ9BZA8 1340 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR6C70A6NIJ9 312 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PCP4L1A6NKN8 68 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR6C75A6NL08 312 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ANHXE9PGG2 379 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CTDSPLO15194 276 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 XRCC3O43542 346 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 DCTN3O75935 186 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CTSDP07339 412 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 CPN1P15169 458 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CD82P27701 267 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CEACAM8P31997 349 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 SUMO1P63165 101 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 IRX1P78414 480 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 PLCXD2Q0VAA5 305 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 C3AR1Q16581 482 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 DUSP5Q16690 384 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ACOT6Q3I5F7 207 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 C6orf52Q5T4I8 152 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD16Q6P6B7 361 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CYS1Q717R9 158 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GALNTL5Q7Z4T8 443 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ERI1Q8IV48 349 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR8I2Q8N0Y5 310 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CLEC4FQ8N1N0 589 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 DYNAPQ8N1N2 210 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PPM1KQ8N3J5 372 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 AMER2Q8N7J2 671 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR4F17Q8NGA8 305 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SFXN5Q8TD22 340 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 NEK7Q8TDX7 302 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GPX8Q8TED1 209 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CCDC12Q8WUD4 166 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 UBTD2Q8WUN7 234 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ADAMTS14Q8WXS8 1223 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 DNASE2BQ8WZ79 361 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 POMGNT1Q8WZA1 660 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 KLHL15Q96M94 604 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 MUS81Q96NY9 551 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 MCHR1Q99705 422 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 LRRC61Q9BV99 259 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ALG8Q9BVK2 526 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CACNG6Q9BXT2 260 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 STRADBQ9C0K7 418 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SRRQ9GZT4 340 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SLC22A4Q9H015 551 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR2AG1Q9H205 316 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PRDM13Q9H4Q3 707 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 Q9H521 79 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 WDR26Q9H7D7 661 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ANKRA2Q9H9E1 313 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 DLL4Q9NR61 685 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TOPORSQ9NS56 1045 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 MTRF1LQ9UGC7 380 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 FETUBQ9UGM5 382 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FBXL2Q9UKC9 423 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 HPSEQ9Y251 543 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 HS3ST3B1Q9Y662 390 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SLC22A7Q9Y694 548 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 VPS8Q8N3P4 1428 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SIP14410 1827 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FAT3Q8TDW7 4589 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 A0A096LPK6 155 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 NCF1BA6NI72 391 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 SRRM4A7MD48 611 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 NCF1CA8MVU1 366 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 DIRC3C9JPN6 131 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TAAR5O14804 337 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FFAR3O14843 346 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GPR182O15218 404 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SLC16A4O15374 487 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GPR42O15529 346 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CYTH3O43739 400 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR12D1P0DN82 309 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SKILP12757 684 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 UCP1P25874 307 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 NNMTP40261 264 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 MTNR1BP49286 362 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 HADHBP55084 474 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 WDR5P61964 334 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 RAE1P78406 368 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 ABATP80404 500 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 COL10A1Q03692 680 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms