RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 AP4M1O00189 453 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 LATO43561 262 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 GPRIN2O60269 458 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 LRP3O75074 770 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 SLC2A5P22732 501 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 FRKP42685 505 aaPredicted RBP11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 RPS10P46783 165 aaKnown RBP11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 ILF3Q12906 894 aaKnown RBP eCLIP11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 EBPQ15125 230 aaKnown RBP11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 Q499Y3 187 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 DHRS11Q6UWP2 260 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 PLXNA3P51805 1871 aa11.9□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF106Q9H2Y7 1883 aaKnown RBP11.9□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3EA0A087X179 549 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 A0A1W2PPE2 198 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CD96P40200 585 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF136P52737 540 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 KIAA0141Q14154 515 aaPredicted RBP11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ARHGAP11AQ6P4F7 1023 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 TMEM25Q86YD3 366 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC35F3Q8IY50 421 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ACTRT3Q9BYD9 372 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CST11Q9H112 138 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 RHBGQ9H310 441 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CEP290O15078 2479 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 C17orf113A0A1B0GUU1 675 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 DCTN6O00399 190 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF432O94892 652 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CCKBRP32239 447 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CEBPGP53567 150 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 TAS2R19P59542 299 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 KLHDC8AQ8IYD2 350 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 SYS1Q8N2H4 156 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 C10orf53Q8N6V4 93 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 FRMD1Q8N878 549 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ACOT4Q8N9L9 421 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ZDHHC5Q9C0B5 715 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 SEC61A2Q9H9S3 476 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CCL26Q9Y258 94 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 WDR87Q6ZQQ6 2873 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 PHYHO14832 338 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 MT-ND4LP03901 98 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 HEXAP06865 529 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ADH1AP07327 375 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 RAB5AP20339 215 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ITGA3P26006 1051 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 HOXC8P31273 242 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 SERPINF1P36955 418 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 GLP1RP43220 463 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 S100A10P60903 97 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 SQSTM1Q13501 440 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ACTBL2Q562R1 376 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 PYY3Q5JQD4 70 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF565Q8N9K5 539 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CLEC1AQ8NC01 280 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 FOXN4Q96NZ1 517 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 GSKIPQ9P0R6 139 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 MSRAQ9UJ68 235 aa11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF223Q9UK11 482 aaPredicted RBP11.89□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3DA0A087WVF3 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3IA0A087WXS9 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3KA0A087X1G2 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 C7orf77A4D0Y5 90 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3BA6NDS4 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3FA6NER0 549 aaPredicted RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3LB9A6J9 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 MCIDASD6RGH6 385 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TMEM189-UBE2V1I3L0A0 370 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 WNT11O96014 354 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 CD8AP01732 235 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 CTSLP07711 333 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3HP0C7X1 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 ACTBP60709 375 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 ACTG1P63261 375 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 DUSP5Q16690 384 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3GQ6DHY5 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3CQ6IPX1 549 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TBC1D3Q8IZP1 549 aaPredicted RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 OR10D4PQ8NGN7 298 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 LURAP1Q96LR2 239 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 MTHFD2LQ9H903 347 aaPredicted RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 SRA1Q9HD15 236 aaKnown RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TM7SF3Q9NS93 570 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 GFOD1Q9NXC2 390 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 ETV7Q9Y603 341 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 PLXNB3Q9ULL4 1909 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 ADAMTS4O75173 837 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 IFNA2P01563 188 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 CD74P04233 296 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 ITGB2P05107 769 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 ACKR3P25106 362 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 LPAR6P43657 344 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 RIDAP52758 137 aaKnown RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 C2orf76Q3KRA6 126 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms