RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RPS15P62841 145 aaKnown RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 RPS21P63220 83 aaKnown RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 TWF1Q12792 350 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 PSG5Q15238 335 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 GUCA2BQ16661 112 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 KRTAP13-3Q3SY46 172 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 PIGGQ5H8A4 983 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 C22orf42Q6IC83 251 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 ANKRD26P1Q6NSI1 321 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 ABHD13Q7L211 337 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 SCD5Q86SK9 330 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 IQCKQ8N0W5 287 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 SLC34A3Q8N130 599 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 FBXL13Q8NEE6 735 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 OR4A4PQ8NGN8 299 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 OR10R2Q8NGX6 335 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 TSEN15Q8WW01 171 aaKnown RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 EXOSC8Q96B26 276 aaKnown RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 ZNF799Q96GE5 643 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 PKNOX2Q96KN3 472 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 DNTTIP1Q9H147 329 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 LINC00597Q9H2U6 94 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 CWH43Q9H720 699 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 EXO5Q9H790 373 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 UGT1A7Q9HAW7 530 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 UGT1A10Q9HAW8 530 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 UGT1A8Q9HAW9 530 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 FGF20Q9NP95 211 aaPredicted RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 DMAP1Q9NPF5 467 aaPredicted RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 GPATCH2LQ9NWQ4 482 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 ZNFX1Q9P2E3 1918 aaKnown RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 MEGF6O75095 1541 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 CENPJQ9HC77 1338 aaPredicted RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 CNTNAP1P78357 1384 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 CDC42BPBQ9Y5S2 1711 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 IGHV3-64DA0A0J9YX35 117 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 SUPT3HO75486 399 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 PCCAP05165 728 aaPredicted RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 PLEKP08567 350 aaPredicted RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 CNR1P21554 472 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 LHX2P50458 406 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ACTA2P62736 377 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ACTG2P63267 376 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ACTC1P68032 377 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ACTA1P68133 377 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 IRX3P78415 501 aaPredicted RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 REG3AQ06141 175 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 TCP10Q12799 353 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 MERTKQ12866 999 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 TMEM183BQ1AE95 376 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 TTLL9Q3SXZ7 439 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ZNF530Q6P9A1 599 aaPredicted RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 Q6ZSR3 168 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 SSX9Q7RTT3 188 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 SLC16A14Q7RTX9 510 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 LUZP2Q86TE4 346 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 TMEM183AQ8IXX5 376 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ARIH2OSQ8N7S6 290 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 SLC7A13Q8TCU3 470 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 LKAAEAR1Q8TD35 194 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ACTRT1Q8TDG2 376 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 DNAJC19Q96DA6 116 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 RNF185Q96GF1 192 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 SLC29A1Q99808 456 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 MTG1Q9BT17 334 aaPredicted RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 SLC25A39Q9BZJ4 359 aaPredicted RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 OR51M1Q9H341 326 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 RPF2Q9H7B2 306 aaKnown RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 ANKRA2Q9H9E1 313 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 ZNF331Q9NQX6 463 aaPredicted RBP2.66□□□□□ -1.98
SMC4-225ENST00000497203 GCNT4Q9P109 453 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 NEU3Q9UQ49 428 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 TMED5Q9Y3A6 229 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 AKNAQ7Z591 1439 aa2.66□□□□□ -1.98
SMC4-225ENST00000497203 CEMIPQ8WUJ3 1361 aa2.65□□□□□ -1.98
SMC4-225ENST00000497203 GLYATL1P3A0A0U1RQE8 302 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 SMCO2A6NFE2 343 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 OR2AG2A6NM03 316 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 F6UB75 175 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 WRBO00258 174 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 DNALI1O14645 258 aaPredicted RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 CASQ2O14958 399 aaPredicted RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 CLPXO76031 633 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 RAB3DO95716 219 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 AIFM1O95831 613 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 TSPAN13O95857 204 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 PSG2P11465 335 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 ZNF30P17039 623 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 OMGP23515 440 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 AQP2P41181 271 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 RPS10P46783 165 aaKnown RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 CX3CR1P49238 355 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 HMGCS1Q01581 520 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 IL18Q14116 193 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 SF3A2Q15428 464 aaKnown RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 CHRNA6Q15825 494 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 PPM1LQ5SGD2 360 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 CCNJQ5T5M9 372 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 REEP3Q6NUK4 255 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 TTC23LQ6PF05 361 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms