RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	P2RY12	Q9H244	342 aa		7.52	□□□□□ -1.21
CRNKL1-205	ENST00000496549	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
CRNKL1-205	ENST00000496549	MTFP1	Q9UDX5	166 aa		7.52	□□□□□ -1.21
CRNKL1-205	ENST00000496549	UBR3	Q6ZT12	1888 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	XKRY2	A2RUG3	117 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	XKRY	O14609	159 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	GUSB	P08236	651 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TFPI	P10646	304 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	GALNS	P34059	522 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	RHOA	P61586	193 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	RPS26	P62854	115 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	DHRS2	Q13268	280 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SGCG	Q13326	291 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	GGTA1P	Q4G0N0	100 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TRIM61	Q5EBN2	209 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549		Q5PR19	223 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	FAHD2B	Q6P2I3	314 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	VHLL	Q6RSH7	139 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	GALNTL5	Q7Z4T8	443 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CTU1	Q7Z7A3	348 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	LYG2	Q86SG7	212 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	MEX3D	Q86XN8	651 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TMEM86A	Q8N2M4	240 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	FAM213B	Q8TBF2	198 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	FAHD2A	Q96GK7	314 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	JSRP1	Q96MG2	331 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	MENT	Q9BUN1	341 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SMG9	Q9H0W8	520 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	FBXO44	Q9H4M3	255 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TM7SF3	Q9NS93	570 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	ZCCHC3	Q9NUD5	404 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CACFD1	Q9UGQ2	172 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	PADI1	Q9ULC6	663 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	DUXA	A6NLW8	204 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	FGF16	O43320	207 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	XRCC3	O43542	346 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	PLPP2	O43688	288 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CNMD	O75829	334 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CD74	P04233	296 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CD3D	P04234	171 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	EDN1	P05305	212 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TIMP2	P16035	220 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SERPINA2	P20848	420 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	S100A7	P31151	101 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	OR3A2	P47893	321 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TDGF1P3	P51864	188 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	KLF3	P57682	345 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	EFNB1	P98172	346 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SSBP1	Q04837	148 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	IL10RA	Q13651	578 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	EXOSC6	Q5RKV6	272 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TCTN3	Q6NUS6	607 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SBSN	Q6UWP8	590 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	OR4D9	Q8NGE8	314 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	THAP3	Q8WTV1	239 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	GALNT14	Q96FL9	552 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SLC6A18	Q96N87	628 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CNN2	Q99439	309 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	OR8D2	Q9GZM6	311 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	HIPK2	Q9H2X6	1198 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	ELP3	Q9H9T3	547 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	GLRX2	Q9NS18	164 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	FKBP11	Q9NYL4	201 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SHROOM3	Q8TF72	1996 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	OR2W5	A6NFC9	320 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	HCRT	O43612	131 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	RHOC	P08134	193 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	RPS13	P62277	151 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SIRPA	P78324	504 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SIM1	P81133	766 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SRSF3	P84103	164 aa	Known RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CDC42EP1	Q00587	391 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	C10orf120	Q5SQS8	335 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	C1orf185	Q5T7R7	199 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TOMM20L	Q6UXN7	152 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	COX15	Q7KZN9	410 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	IFI44	Q8TCB0	444 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	MITD1	Q8WV92	249 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	LYSMD1	Q96S90	227 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	FAM83C	Q9BQN1	747 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	ORAI3	Q9BRQ5	295 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	DEFB129	Q9H1M3	183 aa		7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549	ZNF552	Q9H707	407 aa	Predicted RBP	7.51	□□□□□ -1.21
CRNKL1-205	ENST00000496549		A6NIZ1	184 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TRDC	B7Z8K6	153 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CLDN34	H7C241	214 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549		M0QYG6	137 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SMAD6	O43541	496 aa	Known RBP	7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	BNIP3L	O60238	219 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	KLF8	O95600	359 aa	Predicted RBP	7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CST4	P01036	141 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CTSH	P09668	335 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CD79A	P11912	226 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	CXCR1	P25024	350 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	RAB7A	P51149	207 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	RAP1B	P61224	184 aa		7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	SNRPN	P63162	240 aa	Known RBP	7.5	□□□□□ -1.21
CRNKL1-205	ENST00000496549	TAF9	Q16594	264 aa		7.5	□□□□□ -1.21

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