RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 Q6ZNB5 142 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 BCORP1Q8N888 145 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 ZNF511Q8NB15 262 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 MORN4Q8NDC4 146 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 PAQR8Q8TEZ7 354 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 GHSRQ92847 366 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 CSF3RQ99062 836 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SMIM3Q9BZL3 60 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 FAM234AQ9H0X4 552 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 PROCRQ9UNN8 238 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 A8MXE2 369 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 GFYI3L273 518 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 FZD7O75084 574 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SERPINA7P05543 415 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 HTRA4P83105 476 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 Q6ZS52 159 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 OR4Q3Q8NH05 313 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 C11orf54Q9H0W9 315 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SERTAD4Q9NUC0 356 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 HIF1ANQ9NWT6 349 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 A0A1W2PR48 441 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 FGF17O60258 216 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 KITLGP21583 273 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SERPINF1P36955 418 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SLC43A2Q8N370 569 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 KDM8Q8N371 416 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 CLDN22Q8N7P3 220 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 ABHD4Q8TB40 342 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 PIGTQ969N2 578 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SLC35B4Q969S0 331 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 ZPBPQ9BS86 351 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 C1QTNF6Q9BXI9 259 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 NKX6-2Q9C056 277 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 WWTR1Q9GZV5 400 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 PIGLQ9Y2B2 252 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 ACOT8O14734 319 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 HLA-AP01891 365 aaKnown RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 EIF4EP06730 217 aaKnown RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 CLDN12P56749 244 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 HLA-BQ31612 363 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 CORO6Q6QEF8 472 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 TMEM207Q6UWW9 146 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SLC22A24Q8N4F4 322 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SECTM1Q8WVN6 248 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 TSLPQ969D9 159 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 AMBRA1Q9C0C7 1298 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 SMCO4Q9NRQ5 59 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 KIAA0100Q14667 2235 aaKnown RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 TRGV8A0A0C4DH27 118 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 PMS2P1A4D2B8 440 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 TUBAL3A6NHL2 446 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 CR2P20023 1033 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 RPL27P61353 136 aaKnown RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 AGBL4Q5VU57 503 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 KMT5CQ86Y97 462 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 BHLHE23Q8NDY6 225 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 IL21Q9HBE4 155 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 OR52A1Q9UKL2 312 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 NDRG4Q9ULP0 352 aaKnown RBP12.06□□□□□ -0.48
PTPRF-215ENST00000496447 GLI3P10071 1580 aa12.06□□□□□ -0.48
PTPRF-215ENST00000496447 N4BP2Q86UW6 1770 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-215ENST00000496447 RPS10-NUDT3A0A1W2PQS6 291 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ZNF732B4DXR9 585 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 HTR1FP30939 366 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
PTPRF-215ENST00000496447 BTG1P62324 171 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 MYBPHQ13203 477 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 EDDM3AQ14507 147 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ADPRMQ3LIE5 342 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 PDLIM3Q53GG5 364 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-215ENST00000496447 GDPD3Q7L5L3 318 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 RDH10Q8IZV5 341 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 OR4A16Q8NH70 328 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 PFN4Q8NHR9 129 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 FGGYQ96C11 551 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 MALSU1Q96EH3 234 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 TXNL4BQ9NX01 149 aaKnown RBP12.05□□□□□ -0.48
PTPRF-215ENST00000496447 COA3Q9Y2R0 106 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ATP23Q9Y6H3 246 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 MICAL3Q7RTP6 2002 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 OR6C6A6NF89 314 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 VAMP5O95183 116 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ADRB1P08588 477 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ETV6P41212 452 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 GFERP55789 205 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
PTPRF-215ENST00000496447 Q6ZTK2 550 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 CA13Q8N1Q1 262 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ZBTB44Q8NCP5 570 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ST8SIA2Q92186 375 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 MAP6Q96JE9 813 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 ASIC5Q9NY37 505 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 RCE1Q9Y256 329 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 FIGNL2A6NMB9 653 aa12.05□□□□□ -0.48
PTPRF-215ENST00000496447 M0R082 166 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms