RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 DAG1Q14118 895 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 IQCCQ4KMZ1 466 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 FGD3Q5JSP0 725 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 SAMD4BQ5PRF9 694 aaKnown RBP12.52□□□□□ -0.41
PDAP1-204ENST00000496335 C16orf89Q6UX73 402 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 TMPRSS11FQ6ZWK6 438 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 RRM2BQ7LG56 351 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 HDDC2Q7Z4H3 204 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF584Q8IVC4 421 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 CDK20Q8IZL9 346 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF525Q8N782 197 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 IL17RDQ8NFM7 739 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 NSMAFQ92636 917 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 PYURFQ96I23 114 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 TSPAN32Q96QS1 320 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 ANKRD19PQ9H560 264 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 YLPM1P49750 1951 aaKnown RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 IGHV4-30-2A0A087WSY4 118 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 TRBV4-1A0A0J9YWV2 114 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 A0A1W2PRQ8 180 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 NPIPB13A6NJU9 1138 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 FAM171A2A8MVW0 826 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 B9A039 149 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 NPIPB4C9JG80 1138 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 PDE5AO76074 875 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF26P17031 533 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 NPR2P20594 1047 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 NR4A1P22736 598 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 EFNA4P52798 201 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 SNRPD2P62316 118 aaKnown RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 ERVK-25P63136 954 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 CD47Q08722 323 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 DGCR6Q14129 220 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 KRT72Q14CN4 511 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 SEC23BQ15437 767 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 TAF11Q15544 211 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 MSMPQ1L6U9 139 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 C10orf128Q5T292 105 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 SLC16A14Q7RTX9 510 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 SVOPLQ8N434 492 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 LRRC18Q8N456 261 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 OR52J3Q8NH60 311 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 FAM46AQ96IP4 442 aaKnown RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 SORCS2Q96PQ0 1159 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 PLK3Q9H4B4 646 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 DENND2DQ9H6A0 471 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF442Q9H7R0 627 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 RNF121Q9H920 327 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 STX18Q9P2W9 335 aaKnown RBP12.51□□□□□ -0.41
PDAP1-204ENST00000496335 MAGEL2Q9UJ55 1249 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 UGT2A1Q9Y4X1 527 aa12.51□□□□□ -0.41
PDAP1-204ENST00000496335 ABCA2Q9BZC7 2435 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 TMEM129A0AVI4 362 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 B2RBV5 119 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 H7C1C5 153 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 GPRIN2O60269 458 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 FAM107AO95990 144 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 F12P00748 615 aaPredicted RBP12.5□□□□□ -0.41
PDAP1-204ENST00000496335 IGHMP01871 453 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 SEMG1P04279 462 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 SERPINA5P05154 406 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 CCL2P13500 99 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 SLC9A3P48764 834 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 LCN6P62502 163 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 EFNB3Q15768 340 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 ANKDD1AQ495B1 522 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 ZBED5Q49AG3 693 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 CLEC2AQ6UVW9 174 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 OR10H5Q8NGA6 315 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF519Q8TB69 540 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 NSL1Q96IY1 281 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 NSMCE2Q96MF7 247 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 RHNO1Q9BSD3 238 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 ADAM18Q9Y3Q7 739 aa12.5□□□□□ -0.41
PDAP1-204ENST00000496335 SH3PXD2BA1X283 911 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 ENTPD5O75356 428 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 PTP4A3O75365 173 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 RPL4P36578 427 aaKnown RBP12.49□□□□□ -0.41
PDAP1-204ENST00000496335 OMPP47874 163 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 LIMS1P48059 325 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 MNAT1P51948 309 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 MRPS34P82930 218 aaKnown RBP12.49□□□□□ -0.41
PDAP1-204ENST00000496335 KRTAP1-1Q07627 177 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 SGCAQ16586 387 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 SLC36A2Q495M3 483 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 TMEM53Q6P2H8 277 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 ZCCHC24Q8N2G6 241 aaKnown RBP12.49□□□□□ -0.41
PDAP1-204ENST00000496335 PAQR4Q8N4S7 273 aaPredicted RBP12.49□□□□□ -0.41
PDAP1-204ENST00000496335 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 CCDC197Q8NCU1 140 aa12.49□□□□□ -0.41
PDAP1-204ENST00000496335 NABP1Q96AH0 204 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms