RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZNF544Q6NX49 715 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 BAIAP2L2Q6UXY1 529 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 TMPRSS11AQ6ZMR5 421 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 C19orf35Q6ZS72 473 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 PGAP1Q75T13 922 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 ARCQ7LC44 396 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 PID1Q7Z2X4 250 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 PLA2G4DQ86XP0 818 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 APOBEC3FQ8IUX4 373 aaKnown RBP2.67□□□□□ -1.98
CLK1-214ENST00000496205 DNAAF3Q8N9W5 541 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 OR4A15Q8NGL6 344 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 PYROXD1Q8WU10 500 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 MRGPRFQ96AM1 343 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 ZNF184Q99676 751 aaPredicted RBP2.67□□□□□ -1.98
CLK1-214ENST00000496205 ECSITQ9BQ95 431 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 LLPHQ9BRT6 129 aaKnown RBP2.67□□□□□ -1.98
CLK1-214ENST00000496205 Q9H3A6 140 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 RBKSQ9H477 322 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 TNFRSF19Q9NS68 423 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 QPCTLQ9NXS2 382 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 VNN3Q9NY84 501 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 UBAP1Q9NZ09 502 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 ADA2Q9NZK5 511 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 KIF25Q9UIL4 384 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 VSIG4Q9Y279 399 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 SLC17A4Q9Y2C5 497 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 KCNIP3Q9Y2W7 256 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 FLVCR1Q9Y5Y0 555 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 MYO3BQ8WXR4 1341 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 FANCIQ9NVI1 1328 aa2.67□□□□□ -1.98
CLK1-214ENST00000496205 SMIM28A0A1B0GU29 152 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 LOC110117498-PIK3R3F6TDL0 507 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 GFYI3L273 518 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CALUO43852 315 aaPredicted RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 EIF4E2O60573 245 aaKnown RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 VAPBO95292 243 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 LCA5LO95447 670 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 TSPAN13O95857 204 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 IFNW1P05000 195 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 PMCHP20382 165 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 BGNP21810 368 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 LCN1P31025 176 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CSKP41240 450 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 SLC1A2P43004 574 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CRATP43155 626 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 GPR1P46091 355 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 UCNP55089 124 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 ZNF33AQ06730 810 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 SLC10A7Q0GE19 358 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 ARL6IP1Q15041 203 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CARD16Q5EG05 197 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 SAMD4BQ5PRF9 694 aaKnown RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 TPRG1LQ5T0D9 272 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 GPR107Q5VW38 600 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 OR52E8Q6IFG1 317 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 PRMT9Q6P2P2 845 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 Q6ZSR3 168 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 NDUFAF7Q7L592 441 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 BHLHA15Q7RTS1 189 aaPredicted RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 FAM122BQ7Z309 247 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CMC1Q7Z7K0 106 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 TMEM135Q86UB9 458 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 SLC26A11Q86WA9 606 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 NKAIN4Q8IVV8 208 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 MS4A15Q8N5U1 240 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 SNX31Q8N9S9 440 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 LRRC75AQ8NAA5 344 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 OR10H4Q8NGA5 316 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 LYPD6BQ8NI32 183 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CHCHD10Q8WYQ3 142 aaPredicted RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 ZNF317Q96PQ6 595 aaPredicted RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 NAPGQ99747 312 aaPredicted RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 OSBPL10Q9BXB5 764 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 SRXN1Q9BYN0 137 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 UCK2Q9BZX2 261 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 OR2AG1Q9H205 316 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 GBA3Q9H227 469 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 PIGUQ9H490 435 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 GOLPH3Q9H4A6 298 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 VCX3AQ9NNX9 186 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 HRASLS2Q9NWW9 162 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 THUMPD1Q9NXG2 353 aaKnown RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 IL20Q9NYY1 176 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CCDC59Q9P031 241 aaKnown RBP2.66□□□□□ -1.98
CLK1-214ENST00000496205 TMEM9Q9P0T7 183 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 PRO0461Q9UI25 63 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 KLHL21Q9UJP4 597 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CLEC4EQ9ULY5 219 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 ATP6V1DQ9Y5K8 247 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 CDHR2Q9BYE9 1310 aa2.66□□□□□ -1.98
CLK1-214ENST00000496205 ZFP92A6NM28 416 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 CDC7O00311 574 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 CCL21O00585 134 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 GOSR2O14653 212 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 ZBTB5O15062 677 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 XRCC2O43543 280 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 FADS2O95864 444 aaKnown RBP2.65□□□□□ -1.99
CLK1-214ENST00000496205 TIMP1P01033 207 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 IGHV3-48P01763 117 aa2.65□□□□□ -1.99
CLK1-214ENST00000496205 HSPB1P04792 205 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms