RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 LILRB1Q8NHL6 650 aaPredicted RBP14.28□□□□□ -0.12
SF3A1-209ENST00000496189 GIPC3Q8TF64 312 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 SLCO4A1Q96BD0 722 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 PERPQ96FX8 193 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 DUS3LQ96G46 650 aaKnown RBP14.28□□□□□ -0.12
SF3A1-209ENST00000496189 DHRS9Q9BPW9 319 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 ALG12Q9BV10 488 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 NELFAQ9H3P2 528 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 SMURF2Q9HAU4 748 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 ARMC1Q9NVT9 282 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 MOKQ9UQ07 419 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 SIGLEC7Q9Y286 467 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 OTOGQ6ZRI0 2925 aa14.28□□□□□ -0.12
SF3A1-209ENST00000496189 IGHV1-18A0A0C4DH31 117 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 ARRDC5A6NEK1 342 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 PTP4A3O75365 173 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 IGHMP01871 453 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 CD14P08571 375 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 GSTM3P21266 225 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 FASP25445 335 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 GSSP48637 474 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 IDH3GP51553 393 aaPredicted RBP14.27□□□□□ -0.13
SF3A1-209ENST00000496189 ACTR3P61158 418 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 MYBPC1Q00872 1141 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 ZSCAN26Q16670 478 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 SLC36A2Q495M3 483 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 THEM4Q5T1C6 240 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 ARMC4Q5T2S8 1044 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 GPR139Q6DWJ6 353 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 TMEM53Q6P2H8 277 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 MDP1Q86V88 176 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 IGFN1Q86VF2 1251 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 SLC22A24Q8N4F4 322 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 AQP11Q8NBQ7 271 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 OR4F15Q8NGB8 312 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 OR10G2Q8NGC3 310 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 FANK1Q8TC84 345 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 NEUROG1Q92886 237 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 MCHR2Q969V1 340 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 BDH2Q9BUT1 245 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 RNF121Q9H920 327 aa14.27□□□□□ -0.13
SF3A1-209ENST00000496189 CRNNQ9UBG3 495 aaPredicted RBP14.27□□□□□ -0.13
SF3A1-209ENST00000496189 ATP6V1G2-DDX39BF2Z307 99 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 TIPRLO75663 272 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 IGKV3-15P01624 115 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 HLA-HP01893 362 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 CECR9P0C854 216 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 NPR2P20594 1047 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 SLC6A6P31641 620 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 PTDSS1P48651 473 aaKnown RBP14.26□□□□□ -0.13
SF3A1-209ENST00000496189 RPS6KA3P51812 740 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 RAB1AP62820 205 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 NAAAQ02083 359 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 SPOCK1Q08629 439 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 PPP1R8Q12972 351 aaKnown RBP14.26□□□□□ -0.13
SF3A1-209ENST00000496189 FHL1Q13642 323 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 KPNB1Q14974 876 aaKnown RBP14.26□□□□□ -0.13
SF3A1-209ENST00000496189 HIST3H3Q16695 136 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 RFX4Q33E94 735 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 NRN1LQ496H8 165 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 ZFP1Q6P2D0 407 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 DPY19L2P2Q6ZN68 376 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 SLC16A14Q7RTX9 510 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 TGIF2LYQ8IUE0 185 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 LURAP1LQ8IV03 231 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 MUC15Q8N387 334 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 LRRC75AQ8NAA5 344 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 OR9Q2Q8NGE9 314 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 OR52L1Q8NGH7 329 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 NRBF2Q96F24 287 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF570Q96NI8 536 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 GPX7Q96SL4 187 aaPredicted RBP14.26□□□□□ -0.13
SF3A1-209ENST00000496189 MRPL13Q9BYD1 178 aaKnown RBP14.26□□□□□ -0.13
SF3A1-209ENST00000496189 GSX2Q9BZM3 304 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF556Q9HAH1 456 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 TMEM38BQ9NVV0 291 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 VNN3Q9NY84 501 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF346Q9UL40 294 aaKnown RBP14.26□□□□□ -0.13
SF3A1-209ENST00000496189 SPEF1Q9Y4P9 236 aa14.26□□□□□ -0.13
SF3A1-209ENST00000496189 DSCAMO60469 2012 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 PTHP01270 115 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 GASTP01350 101 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 IGLV1-44P01699 117 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 DANCRP0C864 163 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 APOBEC3AP31941 199 aaPredicted RBP14.25□□□□□ -0.13
SF3A1-209ENST00000496189 TTKP33981 857 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 PTH2RP49190 550 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 ATP5J2P56134 94 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 ERVK-25P63136 954 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 GALK2Q01415 458 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 PLP2Q04941 152 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 PIGFQ07326 219 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 COX10Q12887 443 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 ATP6AP1Q15904 470 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 Q5PR19 223 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 C10orf128Q5T292 105 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF770Q6IQ21 691 aaPredicted RBP14.25□□□□□ -0.13
SF3A1-209ENST00000496189 LRFN4Q6PJG9 635 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 ARIH2OSQ8N7S6 290 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 TSPAN32Q96QS1 320 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms