RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SLC17A5Q9NRA2 495 aa13.9□□□□□ -0.18
SDF4-207ENST00000494748 LOC100289279A0A1B0GTE1 492 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 OR6C76A6NM76 312 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 TMEM212A6NML5 194 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 GRXCR1A8MXD5 290 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 HRKO00198 91 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 SLC17A2O00624 439 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 GPANK1O95872 356 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 CD74P04233 296 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 FBXO45P0C2W1 286 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 HYAL4Q2M3T9 481 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 WDR38Q5JTN6 314 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 TMED4Q7Z7H5 227 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 GPR148Q8TDV2 347 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 CCDC107Q8WV48 283 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 NARS2Q96I59 477 aaKnown RBP13.89□□□□□ -0.19
SDF4-207ENST00000494748 SLC39A1Q9NY26 324 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 CTSFQ9UBX1 484 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 HIF3AQ9Y2N7 669 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 HLA-GP17693 338 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 ITGB8P26012 769 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 TAS2R19P59542 299 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 ACOT7LQ6ZUV0 252 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 PM20D2Q8IYS1 436 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 SLC25A21Q9BQT8 299 aaPredicted RBP13.89□□□□□ -0.19
SDF4-207ENST00000494748 SLC19A3Q9BZV2 496 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 FGF22Q9HCT0 170 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 VSIG4Q9Y279 399 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 CARHSP1Q9Y2V2 147 aaKnown RBP13.89□□□□□ -0.19
SDF4-207ENST00000494748 DISC1C4P0D8 188 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 ZNF432O94892 652 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 RAB3DO95716 219 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 CD37P11049 281 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 SCRN3Q0VDG4 424 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 TOMM20Q15388 145 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 MESTQ5EB52 335 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 ARHGAP40Q5TG30 622 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 LRRC69Q6ZNQ3 347 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 RAB11FIP2Q7L804 512 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 ZNF550Q7Z398 422 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 CA13Q8N1Q1 262 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 PPP1R1CQ8WVI7 109 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 MNTQ99583 582 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 TSNAXQ99598 290 aaKnown RBP13.89□□□□□ -0.19
SDF4-207ENST00000494748 GAREM1Q9H706 876 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 THAP10Q9P2Z0 257 aaPredicted RBP13.89□□□□□ -0.19
SDF4-207ENST00000494748 EPHA6Q9UF33 1036 aa13.89□□□□□ -0.19
SDF4-207ENST00000494748 WIPF3A6NGB9 483 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 F8W036 122 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 H7C1C5 153 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 RFC3P40938 356 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 PRPS1P60891 318 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 LCN6P62502 163 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 LIPHQ8WWY8 451 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 ZNF471Q9BX82 626 aaPredicted RBP13.88□□□□□ -0.19
SDF4-207ENST00000494748 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.88□□□□□ -0.19
SDF4-207ENST00000494748 TMEM100Q9NV29 134 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 ARHGEF17Q96PE2 2063 aaPredicted RBP13.88□□□□□ -0.19
SDF4-207ENST00000494748 CHD9Q3L8U1 2897 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
SDF4-207ENST00000494748 TTLL8A6PVC2 850 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 KCNAB3O43448 404 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 CDC40O60508 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
SDF4-207ENST00000494748 TXNDC12O95881 172 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 ZBTB25P24278 435 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 DLSTP36957 453 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 ACTBP60709 375 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 ACTG1P63261 375 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 SRSF5Q13243 272 aaKnown RBP13.88□□□□□ -0.19
SDF4-207ENST00000494748 LPCAT3Q6P1A2 487 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 ZNF676Q8N7Q3 588 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 SEC22AQ96IW7 307 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 VSTM2LQ96N03 204 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 SLC6A7Q99884 636 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 KLK13Q9UKR3 277 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 OR10H1Q9Y4A9 318 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 COLEC10Q9Y6Z7 277 aa13.88□□□□□ -0.19
SDF4-207ENST00000494748 TGFBR3LH3BV60 316 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 CD79AP11912 226 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 SDHAP31040 664 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 PNLIPRP2P54317 469 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 TCEA2Q15560 299 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 CST6Q15828 149 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 RAB11BQ15907 218 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 ZNF74Q16587 644 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 LRRC37A5PQ49AS3 106 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 FDX2Q6P4F2 183 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 ENPP7Q6UWV6 458 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 SVBPQ8N300 66 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 OR1J4Q8NGS1 313 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 SLC41A2Q96JW4 573 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 ATG5Q9H1Y0 275 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 ACKR4Q9NPB9 350 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 MLXQ9UH92 298 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 OR14I1A6ND48 311 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 SULT1C2O00338 296 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 F12P00748 615 aaPredicted RBP13.87□□□□□ -0.19
SDF4-207ENST00000494748 CD14P08571 375 aa13.87□□□□□ -0.19
SDF4-207ENST00000494748 APEHP13798 732 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms