RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 A0A1W2PR80 420 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 RPL36A-HNRNPH2H7BZ11 118 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 WNT11O96014 354 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 MT-ATP6P00846 226 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 GGT2P36268 569 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 PRPS1P60891 318 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ESRRGP62508 458 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 IL5RAQ01344 420 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 IL1RL1Q01638 556 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 SPOCK1Q08629 439 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ETFDHQ16134 617 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 FGD3Q5JSP0 725 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 LINGO2Q7L985 606 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 SATL1Q86VE3 508 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 KDM8Q8N371 416 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 AQP11Q8NBQ7 271 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 OR9Q2Q8NGE9 314 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 OR1K1Q8NGR3 316 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 RNF217Q8TC41 542 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 NIPSNAP1Q9BPW8 284 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF426Q9BUY5 554 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 TRAF4Q9BUZ4 470 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ASPNQ9BXN1 380 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 DGCR6LQ9BY27 220 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 MAN2C1Q9NTJ4 1040 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 CISD1Q9NZ45 108 aaKnown RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 ARPC4-TTLL3A0A0A6YYG9 625 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 SH3PXD2BA1X283 911 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 TRAPPC13A5PLN9 417 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 CPSF4LA6NMK7 179 aaKnown RBP11.53□□□□□ -0.56
ERCC3-209ENST00000494464 M0R1B8 84 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 SLC1A7O00341 560 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 SLC43A1O75387 559 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 UPK3AO75631 287 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 LYPD3O95274 346 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 INHBBP09529 407 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 IFNA8P32881 189 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 UGT2B15P54855 530 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 ATP5J2P56134 94 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 LTBQ06643 244 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 LGALS3BPQ08380 585 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 CDK5R2Q13319 367 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 C1DQ13901 141 aaKnown RBP11.53□□□□□ -0.56
ERCC3-209ENST00000494464 MAD2L1BPQ15013 274 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-209ENST00000494464 TBRG1Q3YBR2 411 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 HIKESHIQ53FT3 197 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 LAIR2Q6ISS4 152 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 CD300LDQ6UXZ3 194 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 UEVLDQ8IX04 471 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 TMEM123Q8N131 208 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 MPP4Q96JB8 637 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 MOGAT1Q96PD6 335 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 FNDC11Q9BVV2 318 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 SLC19A3Q9BZV2 496 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 RBM38Q9H0Z9 239 aaKnown RBP11.53□□□□□ -0.56
ERCC3-209ENST00000494464 MOV10Q9HCE1 1003 aaKnown RBP11.53□□□□□ -0.56
ERCC3-209ENST00000494464 RHCGQ9UBD6 479 aa11.53□□□□□ -0.56
ERCC3-209ENST00000494464 FAM171A2A8MVW0 826 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 MS4A18H0YCH9 400 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 MRPS14O60783 128 aaKnown RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 OR5F1O95221 314 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 THY1P04216 161 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 HOXB1P14653 301 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 FUT4P22083 530 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 CDH15P55291 814 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 CSNK2BP67870 215 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 ROR2Q01974 943 aaKnown RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 PUDPQ08623 228 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 PIN1Q13526 163 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 SEC23BQ15437 767 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 MS4A18Q3C1V0 323 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 C3orf36Q3SXR2 165 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 AGAP6Q5VW22 663 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 PGBD2Q6P3X8 592 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 ANKRD16Q6P6B7 361 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 SLC22A25Q6T423 547 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 B3GLCTQ6Y288 498 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 DEPDC4Q8N2C3 294 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 GPR137CQ8N3F9 429 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 OR5J2Q8NH18 312 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 SLC7A13Q8TCU3 470 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 BCL2L2Q92843 193 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 GTPBP3Q969Y2 492 aaKnown RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 TRMT61AQ96FX7 289 aaKnown RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 OR2M2Q96R28 347 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 DHRS9Q9BPW9 319 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 NELFAQ9H3P2 528 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 CRNNQ9UBG3 495 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-209ENST00000494464 POU2F3Q9UKI9 436 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 NOX1Q9Y5S8 564 aa11.52□□□□□ -0.57
ERCC3-209ENST00000494464 NF1P21359 2839 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 E7EQL1 145 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 LRRN3E7EW58 273 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 H7C1Q1 480 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 PLPP3O14495 311 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 OR10H3O60404 316 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 GASTP01350 101 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms