RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CBLN4Q9NTU7 201 aa4.49□□□□□ -1.69
PTCD3-219ENST00000494323 ICAM5Q9UMF0 924 aa4.49□□□□□ -1.69
PTCD3-219ENST00000494323 A0A087WUV0 522 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 A0A1W2PRQ8 180 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 CIB4A0PJX0 185 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 WDR91A4D1P6 747 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 DNAJC9-AS1A6NH13 148 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 G3V2L1 256 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 M0R1B8 84 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 SMAD9O15198 467 aaKnown RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 TGFAP01135 160 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 HMGN2P05204 90 aaKnown RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 NGFRP08138 427 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 LINC00032P0C843 101 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 ATP6V1C1P21283 382 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 USF1P22415 310 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 IGFBP5P24593 272 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 GCAP28676 217 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 CAMPP49913 170 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 P2RX1P51575 399 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 CCR4P51679 360 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 DSCR9P59020 149 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 KLF9Q13886 244 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 GGTLC2Q14390 218 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 LASP1Q14847 261 aaKnown RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 CARTPTQ16568 116 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 PCGF3Q3KNV8 242 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 RFTN2Q52LD8 501 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 TIMM23BQ5SRD1 257 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 FAM120AOSQ5T036 256 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 C9orf135Q5VTT2 229 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 C11orf71Q6IPW1 123 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 C8orf74Q6P047 294 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 B3GLCTQ6Y288 498 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 TIFABQ6ZNK6 161 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 OLIG3Q7RTU3 272 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 SLC22A9Q8IVM8 553 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 MISPQ8IVT2 679 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 SLC43A2Q8N370 569 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 ZNF614Q8N883 585 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 POC5Q8NA72 575 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 OR2T11Q8NH01 316 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 FAM76AQ8TAV0 307 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 C10orf105Q8TEF2 133 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 ZFP90Q8TF47 636 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 SGCDQ92629 289 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 PPCDCQ96CD2 204 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 RADILQ96JH8 1075 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 TSSK3Q96PN8 268 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 ABHD1Q96SE0 405 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 THUMPD3Q9BV44 507 aaKnown RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 PLK3Q9H4B4 646 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 REEP4Q9H6H4 257 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 MAP6D1Q9H9H5 199 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 GRPEL1Q9HAV7 217 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 HHATLQ9HCP6 504 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 KLHL9Q9P2J3 617 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 TBK1Q9UHD2 729 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 WBP11Q9Y2W2 641 aaKnown RBP4.48□□□□□ -1.69
PTCD3-219ENST00000494323 FIS1Q9Y3D6 152 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
PTCD3-219ENST00000494323 EXOC1LA0A1B0GW35 172 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 A0A1W2PPM1 405 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 A0A1W2PQD3 144 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 OR5H1A6NKK0 313 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 ZNF724A8MTY0 619 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 H3BNH8 94 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 SULT2B1O00204 365 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 CTDSP2O14595 271 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 KLF11O14901 512 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 RGS14O43566 566 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 KIAA0513O60268 411 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 FCMRO60667 390 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 CYTIPO60759 359 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 RSL1D1O76021 490 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 NDUFB8O95169 186 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 H6PDO95479 791 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 TFPIP10646 304 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 UROSP10746 265 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 MYL2P10916 166 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 LAMP1P11279 417 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 SLC25A16P16260 332 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 SDC1P18827 310 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 CCNA2P20248 432 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 PTAFRP25105 342 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 ELK4P28324 431 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 CCT3P49368 545 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 RASSF2P50749 326 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 EFNA4P52798 201 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 PPP5CP53041 499 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 ATP12AP54707 1039 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 MFAP4P55083 255 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 RUNX1T1Q06455 604 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 HNRNPA0Q13151 305 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 QPRTQ15274 297 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 GABRA6Q16445 453 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 IQCCQ4KMZ1 466 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 CFAP157Q5JU67 520 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 C6orf141Q5SZD1 244 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms