RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SMAD5Q99717 465 aaKnown RBP9.54□□□□□ -0.88
CLCN6-208ENST00000494028 PTGES2Q9H7Z7 377 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 B3GAT2Q9NPZ5 323 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 HPF1Q9NWY4 346 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 MED29Q9NX70 200 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 SLCO1C1Q9NYB5 712 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 MALT1Q9UDY8 824 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 ADAM30Q9UKF2 790 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 ZNF281Q9Y2X9 895 aa9.54□□□□□ -0.88
CLCN6-208ENST00000494028 OTOGLQ3ZCN5 2332 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 A0A1W2PNR3 127 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 LRRC3CA6NJW4 275 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 OR4C45A6NMZ5 311 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 NOTOA8MTQ0 251 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ZNF879B4DU55 563 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 RPP14O95059 124 aaKnown RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 HLA-DQB1P01920 261 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 EIF4EP06730 217 aaKnown RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 CSF3P09919 207 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 SLC2A2P11168 524 aaPredicted RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ZNF17P17021 662 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ATF1P18846 271 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 CRABP1P29762 137 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 EIF1P41567 113 aaKnown RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 BIDP55957 195 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 OR2B6P58173 313 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ADAM8P78325 824 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ROM1Q03395 351 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 MFGE8Q08431 387 aaPredicted RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 EIF3IQ13347 325 aaKnown RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 MADCAM1Q13477 382 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 MEP1BQ16820 701 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 HSD17B12Q53GQ0 312 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 WDR38Q5JTN6 314 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 HES3Q5TGS1 186 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 B3GNTL1Q67FW5 361 aaPredicted RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 SLC18B1Q6NT16 456 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 FDX2Q6P4F2 183 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 METAP1DQ6UB28 335 aaPredicted RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 LRRN1Q6UXK5 716 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 KCTD20Q7Z5Y7 419 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 OR8H2Q8N162 312 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ESX1Q8N693 406 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 GDPD1Q8N9F7 314 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 SUMF1Q8NBK3 374 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 OR2G2Q8NGZ5 317 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 OR52N5Q8NH56 324 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 TRMT10AQ8TBZ6 339 aaKnown RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 ASB17Q8WXJ9 295 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 PHYHIPQ92561 330 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 TXNDC15Q96J42 360 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 CDC6Q99741 560 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 SLC25A18Q9H1K4 315 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 PPP1R3EQ9H7J1 279 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 NOX4Q9NPH5 578 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 TIGARQ9NQ88 270 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 FAM86C1Q9NVL1 165 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 DKKL1Q9UK85 242 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 RASD1Q9Y272 281 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 FARSAQ9Y285 508 aaKnown RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 COA3Q9Y2R0 106 aaPredicted RBP9.53□□□□□ -0.88
CLCN6-208ENST00000494028 HDGFL3Q9Y3E1 203 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 PCDHGA1Q9Y5H4 931 aa9.53□□□□□ -0.88
CLCN6-208ENST00000494028 TRBV5-7A0A0A0MS05 114 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 A0A1B0GTH9 108 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 ANKRD33BA6NCL7 494 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 FABP12A6NFH5 140 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 AQP7P3A6NL99 342 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 BOLA2-SMG1P6H3BVE0 249 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 SEC14L5O43304 696 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 RAMP1O60894 148 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 KHDRBS3O75525 346 aaKnown RBP9.52□□□□□ -0.89
CLCN6-208ENST00000494028 HLA-DQA2P01906 255 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 SERPINA7P05543 415 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 TACSTD2P09758 323 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 ELK1P19419 428 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 PTBP1P26599 531 aaKnown RBP eCLIP9.52□□□□□ -0.89
CLCN6-208ENST00000494028 DPP4P27487 766 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 APEX1P27695 318 aaKnown RBP9.52□□□□□ -0.89
CLCN6-208ENST00000494028 SFTPDP35247 375 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 EVX1P49640 407 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 DSCR4P56555 118 aaPredicted RBP9.52□□□□□ -0.89
CLCN6-208ENST00000494028 GLO1Q04760 184 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 ASAH1Q13510 395 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 SSPNQ14714 243 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 P2RY14Q15391 338 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 PCK2Q16822 640 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 CEP78Q5JTW2 689 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 H3F3CQ6NXT2 135 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 DHRS13Q6UX07 377 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 GDPD3Q7L5L3 318 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 MDGA2Q7Z553 956 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 SYT9Q86SS6 491 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 LRRC28Q86X40 367 aaPredicted RBP9.52□□□□□ -0.89
CLCN6-208ENST00000494028 UEVLDQ8IX04 471 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 PRSS35Q8N3Z0 413 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 TMEM156Q8N614 296 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
CLCN6-208ENST00000494028 ZNF248Q8NDW4 579 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms