RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ALOX12BO75342 701 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 WISP1O95388 367 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 BGLAPP02818 100 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 TDGF1P13385 188 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 NPR2P20594 1047 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 SIRPAP78324 504 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 DCDP81605 110 aaKnown RBP12.45□□□□□ -0.42
VCP-207ENST00000493886 C1QL3Q5VWW1 255 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 CFAP77Q6ZQR2 320 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 C9orf62Q8N4C0 152 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 EID2Q8N6I1 236 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
VCP-207ENST00000493886 EDAQ92838 391 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 SMIM19Q96E16 107 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 DNAJA3Q96EY1 480 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 MRPL48Q96GC5 212 aaKnown RBP12.45□□□□□ -0.42
VCP-207ENST00000493886 TSPAN32Q96QS1 320 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 GTPBP2Q9BX10 602 aaKnown RBP12.45□□□□□ -0.42
VCP-207ENST00000493886 SLC25A18Q9H1K4 315 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 GAREM1Q9H706 876 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 NPFFR2Q9Y5X5 522 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 TRAV36DV7A0A075B6V5 113 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 A0A087WV48 116 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 TRIM3O75382 744 aaPredicted RBP12.45□□□□□ -0.42
VCP-207ENST00000493886 SLC25A12O75746 678 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 TOXO94900 526 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 CFIP05156 583 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 SSTR2P30874 369 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 GDI2P50395 445 aaKnown RBP12.45□□□□□ -0.42
VCP-207ENST00000493886 EMC4Q5J8M3 183 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 TPRA1Q86W33 373 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 STX12Q86Y82 276 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 DHFRP00374 187 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 PDGFAP04085 211 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 EDN3P14138 238 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 HSF2Q03933 536 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 SLC36A2Q495M3 483 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 MESTQ5EB52 335 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 EEF1A1P5Q5VTE0 462 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 BICRALQ6AI39 1079 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 OR11H4Q8NGC9 324 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 GPR119Q8TDV5 335 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ZNF431Q8TF32 576 aaPredicted RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 DUSP19Q8WTR2 217 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 METTL21AQ8WXB1 218 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 THAP4Q8WY91 577 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 NAT6Q93015 286 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ARL5BQ96KC2 179 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 DERL3Q96Q80 235 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 CRLF2Q9HC73 371 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 PRMT8Q9NR22 394 aaPredicted RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 ZNF275Q9NSD4 429 aaPredicted RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ZNF346Q9UL40 294 aaKnown RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 MOKQ9UQ07 419 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 TMED7-TICAM2A0A0A6YYA0 188 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ECDO95905 644 aaPredicted RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 SERPINA3P01011 423 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 TCRBP04435 133 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ZNF250P15622 560 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 EDNRAP25101 427 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 PTBP1P26599 531 aaKnown RBP eCLIP12.44□□□□□ -0.42
VCP-207ENST00000493886 POLR2HP52434 150 aaKnown RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 CLDN12P56749 244 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 OVCH1Q7RTY7 1134 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 SERPINA12Q8IW75 414 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 TEX19Q8NA77 164 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 THAP3Q8WTV1 239 aaPredicted RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 YIPF5Q969M3 257 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 UBL7Q96S82 380 aaPredicted RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 CACNG6Q9BXT2 260 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 DPAGT1Q9H3H5 408 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 SRA1Q9HD15 236 aaKnown RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 TMED7Q9Y3B3 224 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 TRBV2A0A0J9YWF9 115 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 F8W036 122 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 H7C1C5 153 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ADAM10O14672 748 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 SUSD5O60279 629 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 STOMP27105 288 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 EMP2P54851 167 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 LCN6P62502 163 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 SSPNQ14714 243 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ZNF385CQ66K41 422 aaPredicted RBP12.44□□□□□ -0.42
VCP-207ENST00000493886 GPR139Q6DWJ6 353 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 DEFB123Q8N688 67 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 LGALS14Q8TCE9 139 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 PTDSS2Q9BVG9 487 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 TAS2R10Q9NYW0 307 aa12.44□□□□□ -0.42
VCP-207ENST00000493886 ADAMTS9Q9P2N4 1935 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 TMEM72A0PK05 275 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 ACOD1A6NK06 481 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 LEUTXA8MZ59 168 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 DCTN6O00399 190 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 ZNF354AO60765 605 aaPredicted RBP12.43□□□□□ -0.42
VCP-207ENST00000493886 PTHLHP12272 177 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 SLC26A5P58743 744 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms