RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SLC5A10A0PJK1 596 aa18.52■□□□□ 0.56
RNF40-203ENST00000493683 TGOLN2O43493 480 aa18.52■□□□□ 0.56
RNF40-203ENST00000493683 CCR6P51684 374 aa18.52■□□□□ 0.56
RNF40-203ENST00000493683 DEFB103AP81534 67 aa18.52■□□□□ 0.56
RNF40-203ENST00000493683 BSCL2Q96G97 398 aaPredicted RBP18.52■□□□□ 0.56
RNF40-203ENST00000493683 TUSC2O75896 110 aa18.52■□□□□ 0.55
RNF40-203ENST00000493683 CPEP16870 476 aa18.52■□□□□ 0.55
RNF40-203ENST00000493683 RPS19P39019 145 aaKnown RBP18.52■□□□□ 0.55
RNF40-203ENST00000493683 RPL27P61353 136 aaKnown RBP18.52■□□□□ 0.55
RNF40-203ENST00000493683 SYT14P1Q58G82 188 aa18.52■□□□□ 0.55
RNF40-203ENST00000493683 GLIPR1L1Q6UWM5 242 aa18.52■□□□□ 0.55
RNF40-203ENST00000493683 ULBP3Q9BZM4 244 aa18.52■□□□□ 0.55
RNF40-203ENST00000493683 FKRPQ9H9S5 495 aa18.52■□□□□ 0.55
RNF40-203ENST00000493683 NDUFB11Q9NX14 153 aa18.52■□□□□ 0.55
RNF40-203ENST00000493683 THAP10Q9P2Z0 257 aaPredicted RBP18.52■□□□□ 0.55
RNF40-203ENST00000493683 NDRG4Q9ULP0 352 aaKnown RBP18.52■□□□□ 0.55
RNF40-203ENST00000493683 A6NL46 340 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 K7EQM0 130 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 APOBEC1P41238 236 aaKnown RBP18.51■□□□□ 0.55
RNF40-203ENST00000493683 MYH1P12882 1939 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 A0A1W2PPH5 198 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 NKX6-3A6NJ46 265 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 SOD1P00441 154 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 CD1EP15812 388 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 CDKN3Q16667 212 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 CATSPERDQ86XM0 798 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 ZIC5Q96T25 663 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 MYH15Q9Y2K3 1946 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 TNFRSF10CO14798 259 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 HPNP05981 417 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 RNF4P78317 190 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 SNTB1Q13884 538 aaKnown RBP18.51■□□□□ 0.55
RNF40-203ENST00000493683 CAMKMTQ7Z624 323 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 SLC35B4Q969S0 331 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 POFUT1Q9H488 388 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 B3GALT5Q9Y2C3 310 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 ARRDC5A6NEK1 342 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 M0QYG6 137 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 CLEC2LP0C7M8 214 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 SPI1P17947 270 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 TAGLN2P37802 199 aaKnown RBP18.51■□□□□ 0.55
RNF40-203ENST00000493683 OXA1LQ15070 435 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 EXT1Q16394 746 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 BAGE3Q86Y29 109 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 BAGE2Q86Y30 109 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 OR51A4Q8NGJ6 313 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 PDXPQ96GD0 296 aa18.51■□□□□ 0.55
RNF40-203ENST00000493683 EXO1Q9UQ84 846 aaKnown RBP18.51■□□□□ 0.55
RNF40-203ENST00000493683 PMP2P02689 132 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 SBK2P0C263 348 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 SMIM18P0DKX4 95 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 BCL6P41182 706 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 ACVR1Q04771 509 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 INTS12Q96CB8 462 aaKnown RBP18.5■□□□□ 0.55
RNF40-203ENST00000493683 NXPH2O95156 264 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 WNT11O96014 354 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 ABOP16442 354 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 TM4SF4P48230 202 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 FER1L6-AS2Q96M78 137 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 TEAD3Q99594 435 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 TAF9BQ9HBM6 251 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 TARM1B6A8C7 271 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 I6L893 689 aaPredicted RBP18.5■□□□□ 0.55
RNF40-203ENST00000493683 ARHGAP11BQ3KRB8 267 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 C1orf87Q8N0U7 546 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 OR13C8Q8NGS7 320 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 BARHL1Q9BZE3 327 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 HCFC2Q9Y5Z7 792 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 BAK1Q16611 211 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 PURGQ9UJV8 347 aaKnown RBP18.5■□□□□ 0.55
RNF40-203ENST00000493683 PRAMEF25A6NGN4 478 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 ST8SIA3O43173 380 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 VAMP5O95183 116 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 ADRA2CP18825 462 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 TGM4P49221 684 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 CLINT1Q14677 625 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 ZNF813Q6ZN06 617 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 LIPHQ8WWY8 451 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 SLC25A32Q9H2D1 315 aa18.5■□□□□ 0.55
RNF40-203ENST00000493683 ZNF891A8MT65 544 aaPredicted RBP18.49■□□□□ 0.55
RNF40-203ENST00000493683 SELEP16581 610 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 DUSP1P28562 367 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 LPAL2Q16609 132 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 VN1R2Q8NFZ6 395 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 TUBB1Q9H4B7 451 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 JTBO76095 146 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 NID1P14543 1247 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 DCXRQ7Z4W1 244 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 SYS1Q8N2H4 156 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 ZNF511Q8NB15 262 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 CLEC2DQ9UHP7 191 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 C19orf53Q9UNZ5 99 aaPredicted RBP18.49■□□□□ 0.55
RNF40-203ENST00000493683 STRAPQ9Y3F4 350 aaKnown RBP18.49■□□□□ 0.55
RNF40-203ENST00000493683 ADAM12O43184 909 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 ALX3O95076 343 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 LIM2P55344 173 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 VRK3Q8IV63 474 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 SLC35G3Q8N808 338 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 TMEM43Q9BTV4 400 aa18.49■□□□□ 0.55
RNF40-203ENST00000493683 SLC6A17Q9H1V8 727 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms