RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PGA4P0DJD7 388 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 PGA3P0DJD8 388 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 MAKP20794 623 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 SLC6A2P23975 617 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 FPR2P25090 351 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 LCN2P80188 198 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 PLP2Q04941 152 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 MOGQ16653 247 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 LRIF1Q5T3J3 769 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 LINC00114Q6XXX2 140 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 DPPA2Q7Z7J5 298 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 LRRC17Q8N6Y2 441 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 RBM15BQ8NDT2 890 aaKnown RBP10.48□□□□□ -0.73
SAMM50-205ENST00000493621 BHLHE22Q8NFJ8 381 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-205ENST00000493621 OR1J1Q8NGS3 322 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 CCL17Q92583 94 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 ELMOD3Q96FG2 381 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 SLC25A44Q96H78 314 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-205ENST00000493621 MCHR1Q99705 422 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 GAL3ST1Q99999 423 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 LRMDAQ9H2I8 198 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 FAM53CQ9NYF3 392 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 VAPAQ9P0L0 249 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 OPN4Q9UHM6 478 aa10.48□□□□□ -0.73
SAMM50-205ENST00000493621 ISPDA4D126 451 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 CPSF4LA6NMK7 179 aaKnown RBP10.47□□□□□ -0.73
SAMM50-205ENST00000493621 KPNA4O00629 521 aaPredicted RBP10.47□□□□□ -0.73
SAMM50-205ENST00000493621 SPRY3O43610 288 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 CHP2O43745 196 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 FSHBP01225 129 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 IGHV3-13P01766 116 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 CCNOP22674 350 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 PPIBP23284 216 aaKnown RBP10.47□□□□□ -0.73
SAMM50-205ENST00000493621 GATA3P23771 443 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 APLNRP35414 380 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 ZNF81P51508 661 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 CLRN1P58418 232 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 STX1BP61266 288 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 FOXL1Q12952 345 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 ZNF74Q16587 644 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 PAGE3Q5JUK9 113 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 ZNF613Q6PF04 617 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 TTC33Q6PID6 262 aaPredicted RBP10.47□□□□□ -0.73
SAMM50-205ENST00000493621 SHISA2Q6UWI4 295 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 RETREG3Q86VR2 466 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 FUNDC1Q8IVP5 155 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 LRRC18Q8N456 261 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 SMYD1Q8NB12 490 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 HIPK4Q8NE63 616 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 IKZF5Q9H5V7 419 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 TMEM38AQ9H6F2 299 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 ZNF696Q9H7X3 374 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 YY1AP1Q9H869 796 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 EVA1AQ9H8M9 152 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 NTN4Q9HB63 628 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 NANSQ9NR45 359 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 UBAP1Q9NZ09 502 aa10.47□□□□□ -0.73
SAMM50-205ENST00000493621 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
SAMM50-205ENST00000493621 EVPLLA8MZ36 301 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 FMO6PO60774 539 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 MFN2O95140 757 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 IGHV1-46P01743 117 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 IGHG1P01857 330 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 HIST1H2ABP04908 130 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 MMP7P09237 267 aaPredicted RBP10.46□□□□□ -0.73
SAMM50-205ENST00000493621 HKR1P10072 659 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 UMPSP11172 480 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 ZNF84P51523 738 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 HSF2Q03933 536 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 NPTX1Q15818 432 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 FAM209AQ5JX71 171 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 ENTPD8Q5MY95 495 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 SPATA46Q5T0L3 261 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 BLOC1S3Q6QNY0 202 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 EPGNQ6UW88 154 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 RBMS3Q6XE24 437 aaKnown RBP10.46□□□□□ -0.73
SAMM50-205ENST00000493621 HIST3H2AQ7L7L0 130 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 TREML1Q86YW5 311 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 SIGLECL1Q8N7X8 197 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 CPEB3Q8NE35 698 aaKnown RBP10.46□□□□□ -0.73
SAMM50-205ENST00000493621 OR6T1Q8NGN1 323 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 DVL3Q92997 716 aaPredicted RBP10.46□□□□□ -0.73
SAMM50-205ENST00000493621 HIST1H2ACQ93077 130 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 MCHR2Q969V1 340 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 SPDL1Q96EA4 605 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 DUX5Q96PT3 197 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 ZNF347Q96SE7 839 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 ARHGDIGQ99819 225 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 C1QTNF5Q9BXJ0 243 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 SLCO1B3Q9NPD5 702 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 CCDC167Q9P0B6 97 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 TRIM33Q9UPN9 1127 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 ANGPT4Q9Y264 503 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 USH1CQ9Y6N9 552 aa10.46□□□□□ -0.73
SAMM50-205ENST00000493621 TRRAPQ9Y4A5 3859 aa10.45□□□□□ -0.74
SAMM50-205ENST00000493621 TRBV5-3A0A0A0MS03 114 aa10.45□□□□□ -0.74
SAMM50-205ENST00000493621 PLSCR5A0PG75 271 aa10.45□□□□□ -0.74
SAMM50-205ENST00000493621 ATP8B1O43520 1251 aa10.45□□□□□ -0.74
SAMM50-205ENST00000493621 LYPD3O95274 346 aa10.45□□□□□ -0.74
SAMM50-205ENST00000493621 OPN1SWP03999 348 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms