RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PIK3R3Q92569 461 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 HAS2Q92819 552 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 CNRIP1Q96F85 164 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF486Q96H40 463 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PDLIM5Q96HC4 596 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PGAM5Q96HS1 289 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 LURAP1Q96LR2 239 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 URM1Q9BTM9 101 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 LMF2Q9BU23 707 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 C1orf50Q9BV19 199 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 TEX12Q9BXU0 123 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ACPTQ9BZG2 426 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 EXO5Q9H790 373 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 TMEM185BQ9H7F4 350 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ADAP2Q9NPF8 381 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 EQTNQ9NQ60 294 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SLC35C2Q9NQQ7 365 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 AGPAT4Q9NRZ5 378 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 MAT2BQ9NZL9 334 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SLC17A7Q9P2U7 560 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 CLEC4AQ9UMR7 237 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PLEKHA6Q9Y2H5 1048 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 RPH3AQ9Y2J0 694 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 MEMO1Q9Y316 297 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PLLPQ9Y342 182 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SLC22A7Q9Y694 548 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 C15orf38-AP3S2A0A0A6YYH1 394 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 A0A1W2PQ09 198 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 A0A1W2PR80 420 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 MAGEB16A2A368 324 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 G3V2L1 256 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 MANBAO00462 879 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 PHOX2AO14813 284 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 PFDN6O15212 129 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 RIPK2O43353 540 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR10H2O60403 315 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CTNSO60931 367 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ICOSLGO75144 302 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 GLRA3O75311 464 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TRAPPC6AO75865 159 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CDK2AP2O75956 126 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SUPT7LO94864 414 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 GLSO94925 669 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 KLHL2O95198 593 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 IGKV3-11P04433 115 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 QDPRP09417 244 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 FAM58BPP0C7Q3 252 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 JAK1P23458 1154 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 GCH1P30793 250 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SPRP35270 261 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 HSD17B2P37059 387 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 RBMXP38159 391 aaKnown RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CYB561P49447 251 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SSR4P51571 173 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CCNG1P51959 295 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF136P52737 540 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 NME5P56597 212 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 STXBP1P61764 594 aaKnown RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 VSNL1P62760 191 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 RPL38P63173 70 aaKnown RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 KCNJ2P63252 427 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 IGLV3-21P80748 117 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CDKL1Q00532 357 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TLE4Q04727 773 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TFF3Q07654 80 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 HSPB3Q12988 150 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 PCLAFQ15004 111 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CEBPEQ15744 281 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 EXT1Q16394 746 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF791Q3KP31 576 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CCDC92Q53HC0 331 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SLC25A53Q5H9E4 307 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CCNJQ5T5M9 372 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TTC19Q6DKK2 380 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR4C11Q6IEV9 310 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SULT1C3Q6IMI6 304 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TMEM107Q6UX40 140 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 APOOLQ6UXV4 268 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF550Q7Z398 422 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 LUZP2Q86TE4 346 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 NUDT13Q86X67 352 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CDK20Q8IZL9 346 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 MMGT1Q8N4V1 131 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 KRTCAP2Q8N6L1 136 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF615Q8N8J6 731 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 AQP11Q8NBQ7 271 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 BBOF1Q8ND07 529 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR7G2Q8NG99 324 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR52R1Q8NGF1 315 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR5M8Q8NGP6 311 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR10Q1Q8NGQ4 319 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR13C3Q8NGS6 347 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR52N5Q8NH56 324 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR5AK3PQ8NH89 298 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 LINC01560Q8TB33 94 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 M1APQ8TC57 530 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CCDC107Q8WV48 283 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 UBLCP1Q8WVY7 318 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms