RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 PPP2R2BQ00005 443 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 PMS2P3Q13401 168 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 SEC23BQ15437 767 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 GFOD2Q3B7J2 385 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 FAM98BQ52LJ0 330 aaKnown RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 PODNL1Q6PEZ8 512 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 TBPL2Q6SJ96 375 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 CD300LDQ6UXZ3 194 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 AAED1Q7RTV5 226 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 ZER1Q7Z7L7 766 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 P3H2Q8IVL5 708 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 C20orf196Q8IYI0 205 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 LRRC17Q8N6Y2 441 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 ZNF433Q8N7K0 673 aaPredicted RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 OR4C15Q8NGM1 316 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 PFN4Q8NHR9 129 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 MAGEE2Q8TD90 523 aaPredicted RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 CANT1Q8WVQ1 401 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 MCUR1Q96AQ8 359 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 APH1AQ96BI3 265 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 SLC25A36Q96CQ1 311 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 NMD3Q96D46 503 aaKnown RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 SGTBQ96EQ0 304 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 ADAD1Q96M93 576 aaKnown RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 WFIKKN1Q96NZ8 548 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 GPX7Q96SL4 187 aaPredicted RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 SLC7A10Q9NS82 523 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 SEC14L4Q9UDX3 406 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 CLEC4AQ9UMR7 237 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 SIGLEC7Q9Y286 467 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 FAM32AQ9Y421 112 aaKnown RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 TESMINQ9Y4I5 508 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 LYVE1Q9Y5Y7 322 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 FREM1Q5H8C1 2179 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TRBV4-1A0A0J9YWV2 114 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ARRDC5A6NEK1 342 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TUBAL3A6NHL2 446 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 EEF1E1-BLOC1S5C9J1V9 151 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 hCG_2039718K7EN88 272 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 EBAG9O00559 213 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 CDC42EP2O14613 210 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 EEF1E1O43324 174 aaKnown RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 AHCYL1O43865 530 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 GADD45GO95257 159 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TXNDC12O95881 172 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 WNT11O96014 354 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ADAP00813 363 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 HIST1H2ABP04908 130 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ITGA5P08648 1049 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 APEHP13798 732 aaKnown RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 POU2F1P14859 743 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ZNF26P17031 533 aaPredicted RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 CRYGSP22914 178 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 LOXP28300 417 aaPredicted RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 MPGP29372 298 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 KIR2DL3P43628 341 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 FXYD6P3P58550 94 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 PRPS1P60891 318 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 SIRPAP78324 504 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 CHRNB3Q05901 458 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 RPL18Q07020 188 aaKnown RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 GABRA6Q16445 453 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 C3orf36Q3SXR2 165 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 NRN1LQ496H8 165 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ZBED5Q49AG3 693 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TIMM23BQ5SRD1 257 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ARMC4Q5T2S8 1044 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TSPO2Q5TGU0 170 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 OR2T5Q6IEZ7 315 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 OR7E24Q6IFN5 339 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 MEX3BQ6ZN04 569 aaKnown RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 HIST3H2AQ7L7L0 130 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 LUZP2Q86TE4 346 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TMEM200AQ86VY9 491 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 WDFY1Q8IWB7 410 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 NRMQ8IXM6 262 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 CDK20Q8IZL9 346 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 CIARTQ8N365 385 aaPredicted RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 KDM8Q8N371 416 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 C17orf78Q8N4C9 275 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 STEAP2Q8NFT2 490 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 OR4K5Q8NGD3 323 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 OR2T29Q8NH02 315 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 HSD17B8Q92506 261 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 HIST1H2ACQ93077 130 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TMEM54Q969K7 222 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 SLCO4A1Q96BD0 722 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 NRBF2Q96F24 287 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 SLC25A44Q96H78 314 aaPredicted RBP5.9□□□□□ -1.46
VPS52-219ENST00000493379 TXNDC15Q96J42 360 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 OR2M2Q96R28 347 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 GPA33Q99795 319 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 CHID1Q9BWS9 393 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 SLCO5A1Q9H2Y9 848 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 POFUT1Q9H488 388 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 NRIP3Q9NQ35 241 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ARMC1Q9NVT9 282 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 ASB6Q9NWX5 421 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TAS2R16Q9NYV7 291 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms