RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TCEANCQ8N8B7 351 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 NPEPL1Q8NDH3 523 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 ITLN2Q8WWU7 325 aaPredicted RBP15.15■□□□□ 0.02
LIME1-208ENST00000493265 MCHR2Q969V1 340 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 ZNF837Q96EG3 531 aaPredicted RBP15.15■□□□□ 0.02
LIME1-208ENST00000493265 ADI1Q9BV57 179 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 PRRG3Q9BZD7 231 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 LINC00470Q9BZP3 86 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 GPR35Q9HC97 309 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 IGKV1D-43A0A0B4J1Z2 117 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 FAM171A2A8MVW0 826 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 TLX2O43763 284 aaPredicted RBP15.14■□□□□ 0.01
LIME1-208ENST00000493265 LYZL6O75951 148 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 SEC14L2O76054 403 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 GYPBP06028 91 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 PCYT1AP49585 367 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 TSC22D1Q15714 1073 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 CEACAM16Q2WEN9 425 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 SLC25A35Q3KQZ1 300 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 ZNF362Q5T0B9 420 aaPredicted RBP15.14■□□□□ 0.01
LIME1-208ENST00000493265 THEM4Q5T1C6 240 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 SP5Q6BEB4 398 aaPredicted RBP15.14■□□□□ 0.01
LIME1-208ENST00000493265 PLBD1Q6P4A8 553 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 Q6ZT83 130 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 BEND4Q6ZU67 534 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 CXorf67Q86X51 503 aaPredicted RBP15.14■□□□□ 0.01
LIME1-208ENST00000493265 LILRB4Q8NHJ6 448 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 HTRA1Q92743 480 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 UBE2FQ969M7 185 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 HRASLS5Q96KN8 279 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 LRR1Q96L50 414 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 NUAK2Q9H093 628 aa15.14■□□□□ 0.01
LIME1-208ENST00000493265 VSX1Q9NZR4 365 aaPredicted RBP15.14■□□□□ 0.01
LIME1-208ENST00000493265 NDRG4Q9ULP0 352 aaKnown RBP15.14■□□□□ 0.01
LIME1-208ENST00000493265 A0A1W2PPL8 197 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 A8MXE2 369 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 CENPBD1B2RD01 187 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 PRR23D1E9PI22 279 aaPredicted RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 DHHO43323 396 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 PRR23D2P0DMB1 279 aaPredicted RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 CLUP10909 449 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 NR2C1P13056 603 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 CTLA4P16410 223 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 PAICSP22234 425 aaKnown RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 IGHV1-2P23083 117 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 PYCR1P32322 319 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 CAPGP40121 348 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 ASCL1P50553 236 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 ADARB1P78563 741 aaKnown RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 ARF1P84077 181 aaKnown RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 ETFDHQ16134 617 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 HIST3H3Q16695 136 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 TTC23Q5W5X9 447 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 CXXC5Q7LFL8 322 aaKnown RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 ABHD12BQ7Z5M8 362 aaPredicted RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 BCDIN3DQ7Z5W3 292 aaKnown RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 CPOQ8IVL8 374 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 ZNF808Q8N4W9 903 aaPredicted RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 OR51L1Q8NGJ5 315 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 HCAR1Q9BXC0 346 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 OR51V1Q9H2C8 321 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 SEC61A2Q9H9S3 476 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 KCNJ16Q9NPI9 418 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 HINT3Q9NQE9 182 aaKnown RBP15.13■□□□□ 0.01
LIME1-208ENST00000493265 RASSF1Q9NS23 344 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 GALNT8Q9NY28 637 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 AASSQ9UDR5 926 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 MALT1Q9UDY8 824 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 OTOGQ6ZRI0 2925 aa15.13■□□□□ 0.01
LIME1-208ENST00000493265 INTS1Q8N201 2190 aaKnown RBP15.12■□□□□ 0.01
LIME1-208ENST00000493265 ANKRD17O75179 2603 aaKnown RBP15.12■□□□□ 0.01
LIME1-208ENST00000493265 CIB4A0PJX0 185 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 DCTN6O00399 190 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 SLC16A6O15403 523 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 GPANK1O95872 356 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 MPGP29372 298 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 CDAP32320 146 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 ZNF84P51523 738 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 IL5RAQ01344 420 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 FAM27E3Q08E93 113 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 KLHL12Q53G59 568 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 OTPQ5XKR4 325 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 DNM1P34Q6PK57 102 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 XKRXQ6PP77 449 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 SLC25A47Q6Q0C1 308 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 OR6V1Q8N148 313 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 GABRG1Q8N1C3 465 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 PROKR2Q8NFJ6 384 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 BBS1Q8NFJ9 593 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 TMEM163Q8TC26 289 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 NMD3Q96D46 503 aaKnown RBP15.12■□□□□ 0.01
LIME1-208ENST00000493265 PITX2Q99697 317 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 RASSF4Q9H2L5 321 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 JKAMPQ9P055 326 aa15.12■□□□□ 0.01
LIME1-208ENST00000493265 COA3Q9Y2R0 106 aaPredicted RBP15.12■□□□□ 0.01
LIME1-208ENST00000493265 A0A096LPE4 126 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 A0A1W2PPZ6 126 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 H0YJX3 145 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 AHCYL1O43865 530 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms