RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 FCGR1AP12314 374 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ARR3P36575 388 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ZNF133P52736 654 aaPredicted RBP12.19□□□□□ -0.46
CCM2-217ENST00000492883 ATP6AP1Q15904 470 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 SGCAQ16586 387 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 GSG1Q2KHT4 349 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 SLC35F1Q5T1Q4 408 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ADAM5Q6NVV9 412 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 SHQ1Q6PI26 577 aaKnown RBP12.19□□□□□ -0.46
CCM2-217ENST00000492883 SLC22A25Q6T423 547 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ADCK1Q86TW2 530 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 MDP1Q86V88 176 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 JAZF1Q86VZ6 243 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 C10orf67Q8IYJ2 551 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 HS3ST5Q8IZT8 346 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ATG16L2Q8NAA4 619 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 AKAP1Q92667 903 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCM2-217ENST00000492883 HTRA1Q92743 480 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 NIPSNAP1Q9BPW8 284 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 KCNS3Q9BQ31 491 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 TMEM204Q9BSN7 226 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 TSSK6Q9BXA6 273 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 KCNN2Q9H2S1 579 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 LIME1Q9H400 295 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 RERGLQ9H628 205 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 DENND2DQ9H6A0 471 aaPredicted RBP12.19□□□□□ -0.46
CCM2-217ENST00000492883 RNF121Q9H920 327 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 SEC61A2Q9H9S3 476 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 NTN4Q9HB63 628 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 TBC1D23Q9NUY8 699 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 IGHV1-18A0A0C4DH31 117 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 A0A1W2PPL8 197 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 H3BN98 237 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 IDH3BO43837 385 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 MGRN1O60291 552 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 UBL3O95164 117 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 RAB36O95755 333 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 IGFBP1P08833 259 aaPredicted RBP12.18□□□□□ -0.46
CCM2-217ENST00000492883 PATE4P0C8F1 98 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 ANXA8P13928 327 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 NPR2P20594 1047 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 CDAP32320 146 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 CDKN2AP42771 156 aaKnown RBP12.18□□□□□ -0.46
CCM2-217ENST00000492883 PTDSS1P48651 473 aaKnown RBP12.18□□□□□ -0.46
CCM2-217ENST00000492883 IDH3GP51553 393 aaPredicted RBP12.18□□□□□ -0.46
CCM2-217ENST00000492883 RAB1AP62820 205 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 MRPS34P82930 218 aaKnown RBP12.18□□□□□ -0.46
CCM2-217ENST00000492883 NPRL3Q12980 569 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 NRN1LQ496H8 165 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 CD300LDQ6UXZ3 194 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 SLC16A14Q7RTX9 510 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 AMIGO2Q86SJ2 522 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 LRRC18Q8N456 261 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 KBTBD8Q8NFY9 601 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 OR4K13Q8NH42 304 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 OR5K1Q8NHB7 308 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 PYDC1Q8WXC3 89 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 LRTOMTQ8WZ04 291 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 NRBF2Q96F24 287 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 SLC38A2Q96QD8 506 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 SYT4Q9H2B2 425 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 SIAEQ9HAT2 523 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 POU2F3Q9UKI9 436 aa12.18□□□□□ -0.46
CCM2-217ENST00000492883 PTPN13Q12923 2485 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 ZNF503-AS2A6NEH8 195 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 G3V2T6 193 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 SLC16A7O60669 478 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 KHDRBS3O75525 346 aaKnown RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 RENP00797 406 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 IGKV3-15P01624 115 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 CRYAAP02489 173 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 HIST1H1CP16403 213 aaKnown RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 POU1F1P28069 291 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 GIPRP48546 466 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 CENPAP49450 140 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 KEAP1Q14145 624 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 ETFDHQ16134 617 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 SLC36A2Q495M3 483 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 SLC36A3Q495N2 470 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 TMEM53Q6P2H8 277 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 LEG1Q6P5S2 330 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 PTCHD4Q6ZW05 846 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 DPPA2Q7Z7J5 298 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 CDH24Q86UP0 819 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 OR52E2Q8NGJ4 325 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 TEX47Q8TBZ9 253 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 NMNAT3Q96T66 252 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 SRA1Q9HD15 236 aaKnown RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 B3GNT2Q9NY97 397 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 CISD1Q9NZ45 108 aaKnown RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 VSX1Q9NZR4 365 aaPredicted RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 KIF17Q9P2E2 1029 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 CRNNQ9UBG3 495 aaPredicted RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 ST6GALNAC2Q9UJ37 374 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 PLEKHA6Q9Y2H5 1048 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms