RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SLC41A2Q96JW4 573 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 KLHL15Q96M94 604 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 ZCCHC4Q9H5U6 513 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 FOXJ3Q9UPW0 622 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 PRSS37A4D1T9 235 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 MASP2O00187 686 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 ADAM10O14672 748 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 H2AFB2P0C5Z0 115 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 STOMP27105 288 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 DHPSP49366 369 aaPredicted RBP11.21□□□□□ -0.62
HMGN1-220ENST00000492280 CBFBQ13951 182 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 GSG1Q2KHT4 349 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 DMRTC1Q5HYR2 192 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 FAM69AQ5T7M9 428 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 MAMDC2Q7Z304 686 aaPredicted RBP11.21□□□□□ -0.62
HMGN1-220ENST00000492280 LRRTM1Q86UE6 522 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 APCDD1LQ8NCL9 501 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 OR11G2Q8NGC1 345 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 OR4D10Q8NGI6 311 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 RPS4Y2Q8TD47 263 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 LIPHQ8WWY8 451 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 CITED4Q96RK1 184 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 ZMAT3Q9HA38 289 aaKnown RBP11.21□□□□□ -0.62
HMGN1-220ENST00000492280 HRASLSQ9HDD0 168 aa11.21□□□□□ -0.62
HMGN1-220ENST00000492280 MRTO4Q9UKD2 239 aaKnown RBP11.21□□□□□ -0.62
HMGN1-220ENST00000492280 MYO7BQ6PIF6 2116 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 FADS1O60427 444 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 TXNDC12O95881 172 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ITGA5P08648 1049 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ANXA7P20073 488 aaKnown RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ERP29P30040 261 aaKnown RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 GALNSP34059 522 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 SELENOPP49908 381 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 P2RX1P51575 399 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 CCR9P51686 369 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ZP1P60852 638 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ISXQ2M1V0 245 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 OR10K2Q6IF99 312 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 Q7L0L9 218 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 OR51A2Q8NGJ7 313 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 HLA-CQ95604 372 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 C4orf45Q96LM5 186 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ZFP64Q9NPA5 681 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 PRDM6Q9NQX0 595 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 CGGBP1Q9UFW8 167 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 MGAT4AQ9UM21 535 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 TRBV11-1A0A0K0K1C0 115 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 TACSTD2P09758 323 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 IFNGR1P15260 489 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 KLK2P20151 261 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 EPHA4P54764 986 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 TAS2R20P59543 309 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 RPL27P61353 136 aaKnown RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 POU3F1Q03052 451 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 EIF2B1Q14232 305 aaKnown RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 NDUFAF7Q7L592 441 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 DND1Q8IYX4 353 aaKnown RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 C9orf62Q8N4C0 152 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF441Q8N8Z8 693 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 OR52B4Q8NGK2 314 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 CYYR1Q96J86 154 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 ELF5Q9UKW6 265 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-220ENST00000492280 MOKQ9UQ07 419 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 NUBP2Q9Y5Y2 271 aa11.2□□□□□ -0.62
HMGN1-220ENST00000492280 NCOA6Q14686 2063 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-220ENST00000492280 A0A1W2PQM1 296 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 AHSA1O95433 338 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 CELA2AP08217 269 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 APEHP13798 732 aaKnown RBP11.19□□□□□ -0.62
HMGN1-220ENST00000492280 RAD52P43351 418 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 SLC6A8P48029 635 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 PITPNAQ00169 270 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 OC90Q02509 493 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-220ENST00000492280 HSF2Q03933 536 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 FOXF1Q12946 379 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 SGCBQ16585 318 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 TMEM205Q6UW68 189 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 DVL3Q92997 716 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-220ENST00000492280 MVB12AQ96EY5 273 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 COMMD4Q9H0A8 199 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 IGLV1-36A0A0B4J1U3 117 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 C7orf66A4D0T2 115 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 PDCD5O14737 125 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 ALDOBP05062 364 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 POLR2HP52434 150 aaKnown RBP11.19□□□□□ -0.62
HMGN1-220ENST00000492280 KRT77Q7Z794 578 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 PIAS4Q8N2W9 510 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-220ENST00000492280 OR8S1Q8NH09 359 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF519Q8TB69 540 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 ADAMTS14Q8WXS8 1223 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 MRPL48Q96GC5 212 aaKnown RBP11.19□□□□□ -0.62
HMGN1-220ENST00000492280 ABHD6Q9BV23 337 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 RAB33BQ9H082 229 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 EMC9Q9Y3B6 208 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 LRP12Q9Y561 859 aa11.19□□□□□ -0.62
HMGN1-220ENST00000492280 TRBV5-5A0A0J9YX44 114 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 SLC22A23A1A5C7 686 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms